RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 LINC00597Q9H2U6 94 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.27■□□□□ 0.84
TRIO-223ENST00000515710 MARK1Q9P0L2 795 aa20.27■□□□□ 0.84
TRIO-223ENST00000515710 INTS6Q9UL03 887 aaKnown RBP20.27■□□□□ 0.84
TRIO-223ENST00000515710 MIA3Q5JRA6 1907 aa20.26■□□□□ 0.83
TRIO-223ENST00000515710 LDB2O43679 373 aa20.26■□□□□ 0.83
TRIO-223ENST00000515710 MT-CO1P00395 513 aa20.26■□□□□ 0.83
TRIO-223ENST00000515710 DRD4P21917 467 aa20.26■□□□□ 0.83
TRIO-223ENST00000515710 CRHR1P34998 444 aa20.26■□□□□ 0.83
TRIO-223ENST00000515710 MAPK8P45983 427 aa20.26■□□□□ 0.83
TRIO-223ENST00000515710 NDUFAF2Q8N183 169 aa20.26■□□□□ 0.83
TRIO-223ENST00000515710 VN1R2Q8NFZ6 395 aa20.26■□□□□ 0.83
TRIO-223ENST00000515710 PTPRN2Q92932 1015 aa20.26■□□□□ 0.83
TRIO-223ENST00000515710 RMDN1Q96DB5 314 aa20.26■□□□□ 0.83
TRIO-223ENST00000515710 SRPK1Q96SB4 655 aaKnown RBP20.26■□□□□ 0.83
TRIO-223ENST00000515710 NEDD8-MDP1E9PL57 170 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 SLC7A4O43246 635 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 CRTAMO95727 393 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 PRLP01236 227 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 VIMP08670 466 aaKnown RBP20.25■□□□□ 0.83
TRIO-223ENST00000515710 HLA-FP30511 346 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 ACVR1Q04771 509 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 DMC1Q14565 340 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 ZSCAN26Q16670 478 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 NEPROQ6NW34 567 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 LMNTD2Q8IXW0 634 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 LRRC34Q8IZ02 419 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 BLOC1S5Q8TDH9 187 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 STYXQ8WUJ0 223 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 MRPL38Q96DV4 380 aaKnown RBP20.25■□□□□ 0.83
TRIO-223ENST00000515710 SLC2A11Q9BYW1 496 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 SLC17A7Q9P2U7 560 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 PCDHGC4Q9Y5F7 938 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 EPOPA6NHQ4 379 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 GOLGA8TH3BQL2 631 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 TPP1O14773 563 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 ALDOAP04075 364 aaKnown RBP20.25■□□□□ 0.83
TRIO-223ENST00000515710 TYRP14679 529 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 POLD2P49005 469 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 PDK4Q16654 411 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 LY6G5CQ5SRR4 150 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 FSTL4Q6MZW2 842 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 RGS9BPQ6ZS82 235 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 KIAA0408Q6ZU52 694 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 DCLK2Q8N568 766 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 C2CD4AQ8NCU7 369 aaPredicted RBP20.25■□□□□ 0.83
TRIO-223ENST00000515710 OR13J1Q8NGT2 312 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 ATP2A3Q93084 1043 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 CABS1Q96KC9 395 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 SLC13A1Q9BZW2 595 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 NSRP1Q9H0G5 558 aaKnown RBP20.25■□□□□ 0.83
TRIO-223ENST00000515710 VPS11Q9H270 941 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 RHOJQ9H4E5 214 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 PCMTD2Q9NV79 361 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 PLLPQ9Y342 182 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 DOCK6Q96HP0 2047 aa20.25■□□□□ 0.83
TRIO-223ENST00000515710 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.24■□□□□ 0.83
TRIO-223ENST00000515710 TCP11X1B4DZS4 312 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 K7ERQ8 282 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 DHRS4L1P0CG22 281 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 TYK2P29597 1187 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 ETV4P43268 484 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 MAGEA12P43365 314 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 SERPINB8P50452 374 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 SULT2A1Q06520 285 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 SPOCK2Q92563 424 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 FAM107BQ9H098 131 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 MFSD1Q9H3U5 465 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 DCDC2Q9UHG0 476 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 GGA2Q9UJY4 613 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 MTO1Q9Y2Z2 717 aaKnown RBP20.24■□□□□ 0.83
TRIO-223ENST00000515710 WNT6Q9Y6F9 365 aa20.24■□□□□ 0.83
TRIO-223ENST00000515710 ANKRD66B4E2M5 251 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 AHSGP02765 367 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 MPOP05164 745 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 FSHRP23945 695 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 TRAF2Q12933 501 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 INSCQ1MX18 579 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 TMEM184AQ6ZMB5 413 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 ZC3HC1Q86WB0 502 aaKnown RBP20.23■□□□□ 0.83
TRIO-223ENST00000515710 ISG20Q96AZ6 181 aaKnown RBP20.23■□□□□ 0.83
TRIO-223ENST00000515710 VPS39Q96JC1 886 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 GRID1Q9ULK0 1009 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 SMAD6O43541 496 aaKnown RBP20.23■□□□□ 0.83
TRIO-223ENST00000515710 FZD6O60353 706 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 GLRA3O75311 464 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 PDHA1P08559 390 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 PABPC1P11940 636 aaKnown RBP20.23■□□□□ 0.83
TRIO-223ENST00000515710 TAC1P20366 129 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 FOXN2P32314 431 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 PRAMEP78395 509 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 ILF2Q12905 390 aaKnown RBP20.23■□□□□ 0.83
TRIO-223ENST00000515710 TAF1AQ15573 450 aaPredicted RBP20.23■□□□□ 0.83
TRIO-223ENST00000515710 RARS2Q5T160 578 aaKnown RBP20.23■□□□□ 0.83
TRIO-223ENST00000515710 ATXN7L2Q5T6C5 722 aaPredicted RBP20.23■□□□□ 0.83
TRIO-223ENST00000515710 ASTLQ6HA08 431 aaPredicted RBP20.23■□□□□ 0.83
TRIO-223ENST00000515710 CDHR3Q6ZTQ4 885 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 KIAA0907Q7Z7F0 614 aaPredicted RBP20.23■□□□□ 0.83
TRIO-223ENST00000515710 GALNT7Q86SF2 657 aa20.23■□□□□ 0.83
TRIO-223ENST00000515710 GPR149Q86SP6 731 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms