RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 CBFA2T3O75081 653 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 SOCS5O75159 536 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 TIMP2P16035 220 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 CCNCP24863 283 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 PMLP29590 882 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 GRK6P43250 576 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 MMP13P45452 471 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 SCNN1BP51168 640 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 POLR2LP62875 67 aaKnown RBP12.9□□□□□ -0.34
CLCN3-210ENST00000515420 FGL2Q14314 439 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 TMEM52BQ4KMG9 183 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 ZFYVE27Q5T4F4 411 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 CFAP58Q5T655 872 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 N4BP2L1Q5TBK1 243 aaPredicted RBP12.9□□□□□ -0.34
CLCN3-210ENST00000515420 MARC1Q5VT66 337 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 ALG1LQ6GMV1 187 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 C11orf63Q6NUN7 778 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 ERAP2Q6P179 960 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 KYAT3Q6YP21 454 aaKnown RBP12.9□□□□□ -0.34
CLCN3-210ENST00000515420 GCNT7Q6ZNI0 430 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 TEX26Q8N6G2 289 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 PQLC3Q8N755 202 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 NETO2Q8NC67 525 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 CXorf40AQ8TE69 158 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 RAPGEF5Q92565 580 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 IFT43Q96FT9 208 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 ZNF830Q96NB3 372 aaPredicted RBP12.9□□□□□ -0.34
CLCN3-210ENST00000515420 RNF157Q96PX1 679 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 NUDCD1Q96RS6 583 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 CDC6Q99741 560 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 C1QTNF7Q9BXJ2 289 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 KLHL11Q9NVR0 708 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 PCOLCE2Q9UKZ9 415 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 PCDHB9Q9Y5E1 797 aa12.9□□□□□ -0.34
CLCN3-210ENST00000515420 EPN1Q9Y6I3 576 aaPredicted RBP12.9□□□□□ -0.34
CLCN3-210ENST00000515420 IGLON5A6NGN9 336 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 SOWAHDA6NJG2 315 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 BTNL10A8MVZ5 291 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 MATN3O15232 486 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 HTRA2O43464 458 aaPredicted RBP12.89□□□□□ -0.35
CLCN3-210ENST00000515420 SPOPO43791 374 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 TM7SF2O76062 418 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 THEGLP0DJG4 465 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 ZFXP17010 805 aaPredicted RBP12.89□□□□□ -0.35
CLCN3-210ENST00000515420 COMTP21964 271 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 CES1P23141 567 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 NFKBIAP25963 317 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 EPHA8P29322 1005 aaPredicted RBP12.89□□□□□ -0.35
CLCN3-210ENST00000515420 MMP12P39900 470 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 SHC2P98077 582 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 AGERQ15109 404 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 TRIP6Q15654 476 aaKnown RBP12.89□□□□□ -0.35
CLCN3-210ENST00000515420 SLC9A4Q6AI14 798 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 SPATS2Q86XZ4 545 aaKnown RBP12.89□□□□□ -0.35
CLCN3-210ENST00000515420 CAMK1DQ8IU85 385 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 MAML1Q92585 1016 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 KLK6Q92876 244 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 HDAC11Q96DB2 347 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 KLF6Q99612 283 aaPredicted RBP12.89□□□□□ -0.35
CLCN3-210ENST00000515420 GGT7Q9UJ14 662 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 ITM2BQ9Y287 266 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 ATP8A1Q9Y2Q0 1164 aa12.89□□□□□ -0.35
CLCN3-210ENST00000515420 GOLGA6L6A8MZA4 724 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 RIOK3O14730 519 aaKnown RBP12.88□□□□□ -0.35
CLCN3-210ENST00000515420 FPGTO14772 594 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 TRIM16O95361 564 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 PAK4O96013 591 aaPredicted RBP12.88□□□□□ -0.35
CLCN3-210ENST00000515420 KRT1P04264 644 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 NOP2P46087 812 aaKnown RBP12.88□□□□□ -0.35
CLCN3-210ENST00000515420 RABIFP47224 123 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 SIM1P81133 766 aaPredicted RBP12.88□□□□□ -0.35
CLCN3-210ENST00000515420 ODF2Q5BJF6 829 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 TXLNBQ8N3L3 684 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 PGBD5Q8N414 524 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 PLD5Q8N7P1 536 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 OR13H1Q8NG92 308 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.88□□□□□ -0.35
CLCN3-210ENST00000515420 SAP25Q8TEE9 199 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 SETD7Q8WTS6 366 aaKnown RBP12.88□□□□□ -0.35
CLCN3-210ENST00000515420 CENPTQ96BT3 561 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 BMFQ96LC9 184 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 BAG1Q99933 345 aaPredicted RBP12.88□□□□□ -0.35
CLCN3-210ENST00000515420 POLR1EQ9GZS1 481 aaKnown RBP12.88□□□□□ -0.35
CLCN3-210ENST00000515420 BRD8Q9H0E9 1235 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 FZD3Q9NPG1 666 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 PCDH12Q9NPG4 1184 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 DTLQ9NZJ0 730 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 CA5BQ9Y2D0 317 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 ALG6Q9Y672 507 aa12.88□□□□□ -0.35
CLCN3-210ENST00000515420 ARID1BQ8NFD5 2236 aaPredicted RBP12.87□□□□□ -0.35
CLCN3-210ENST00000515420 KCNK3O14649 394 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 APOL1O14791 398 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 PFN3P60673 137 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 YPEL5P62699 121 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 GBE1Q04446 702 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 PPIDQ08752 370 aaKnown RBP12.87□□□□□ -0.35
CLCN3-210ENST00000515420 SHBQ15464 509 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 TAZQ16635 292 aa12.87□□□□□ -0.35
CLCN3-210ENST00000515420 LRRC73Q5JTD7 316 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms