RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 TASP1Q9H6P5 420 aa12.91□□□□□ -0.34
SMAD1-215ENST00000515385 LRRC40Q9H9A6 602 aa12.91□□□□□ -0.34
SMAD1-215ENST00000515385 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.91□□□□□ -0.34
SMAD1-215ENST00000515385 TJP2Q9UDY2 1190 aa12.91□□□□□ -0.34
SMAD1-215ENST00000515385 WARS2Q9UGM6 360 aaKnown RBP12.91□□□□□ -0.34
SMAD1-215ENST00000515385 MAGEB16A2A368 324 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 DPYSL4O14531 572 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 SNPHO15079 494 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 RFPL2O75678 378 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 CLIC3O95833 236 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 CST3P01034 146 aaPredicted RBP12.9□□□□□ -0.34
SMAD1-215ENST00000515385 PDGFRAP16234 1089 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 CD40LGP29965 261 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 PTPN9P43378 593 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 SESN2P58004 480 aaPredicted RBP12.9□□□□□ -0.34
SMAD1-215ENST00000515385 TGFB2P61812 414 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 IRF9Q00978 393 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 LRIT3Q3SXY7 679 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 BTBD8Q5XKL5 378 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 TAS2R42Q7RTR8 314 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 DSG4Q86SJ6 1040 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 LDHDQ86WU2 507 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 BRSK2Q8IWQ3 736 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 ADGRG5Q8IZF4 528 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 PAPD5Q8NDF8 572 aaKnown RBP12.9□□□□□ -0.34
SMAD1-215ENST00000515385 OR6Q1Q8NGQ2 317 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 PHF10Q8WUB8 498 aaKnown RBP12.9□□□□□ -0.34
SMAD1-215ENST00000515385 RXFP2Q8WXD0 754 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 MUL1Q969V5 352 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 VPS33AQ96AX1 596 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 AKT1S1Q96B36 256 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 ERLEC1Q96DZ1 483 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 C17orf80Q9BSJ5 609 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 CENPOQ9BU64 300 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 IDI2Q9BXS1 227 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 ING2Q9H160 280 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 POLR3FQ9H1D9 316 aaPredicted RBP12.9□□□□□ -0.34
SMAD1-215ENST00000515385 NEK6Q9HC98 313 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 NECTIN3Q9NQS3 549 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 NSMCE4AQ9NXX6 385 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 ABCD2Q9UBJ2 740 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
SMAD1-215ENST00000515385 SFMBT1Q9UHJ3 866 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 AFG3L2Q9Y4W6 797 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 UGT2A1Q9Y4X1 527 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 E2F8A0AVK6 867 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 CCDC78A2IDD5 438 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 SAGE2PA6NJ88 616 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 GPC4O75487 556 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 GDF11O95390 407 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 ITIH1P19827 911 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 RFC2P35250 354 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 BMPR1AP36894 532 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 PPP5CP53041 499 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 ECT2LQ008S8 904 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 AQP6Q13520 282 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 KRR1Q13601 381 aaKnown RBP12.9□□□□□ -0.34
SMAD1-215ENST00000515385 ANO4Q32M45 955 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 TAF2Q6P1X5 1199 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 SLC16A12Q6ZSM3 486 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 PIWIL4Q7Z3Z4 852 aaKnown RBP12.9□□□□□ -0.34
SMAD1-215ENST00000515385 SLC51AQ86UW1 340 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 SPARTQ8N0X7 666 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 SPPL2BQ8TCT7 592 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 ZFP90Q8TF47 636 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 OSCP1Q8WVF1 389 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 MEAF6Q9HAF1 191 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 CNGB3Q9NQW8 809 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 SYBUQ9NX95 663 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 KLQ9UEF7 1012 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 POLLQ9UGP5 575 aa12.9□□□□□ -0.34
SMAD1-215ENST00000515385 DDTLA6NHG4 134 aaPredicted RBP12.89□□□□□ -0.35
SMAD1-215ENST00000515385 EVPLLA8MZ36 301 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 ALX3O95076 343 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 JUNP05412 331 aaKnown RBP12.89□□□□□ -0.35
SMAD1-215ENST00000515385 SLURP2P0DP57 97 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 BMP1P13497 986 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 NR4A1P22736 598 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 CRHBPP24387 322 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 YAP1P46937 504 aaKnown RBP12.89□□□□□ -0.35
SMAD1-215ENST00000515385 POLD2P49005 469 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 CSRP3P50461 194 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 CRADDP78560 199 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 GHRHRQ02643 423 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 HIST2H2ACQ16777 129 aaPredicted RBP12.89□□□□□ -0.35
SMAD1-215ENST00000515385 DUOXA2Q1HG44 320 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 TUBA3EQ6PEY2 450 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 THAP5Q7Z6K1 395 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 TMEM151AQ8N4L1 468 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 CERS5Q8N5B7 392 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 ANGPTL6Q8NI99 470 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 MAGEE2Q8TD90 523 aaPredicted RBP12.89□□□□□ -0.35
SMAD1-215ENST00000515385 HTR3CQ8WXA8 447 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 SCYL1Q96KG9 808 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 UBXN10Q96LJ8 280 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 CEP295NLQ96MC4 621 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 SNX18Q96RF0 628 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 MRIQ9BWK5 157 aa12.89□□□□□ -0.35
SMAD1-215ENST00000515385 RAVER2Q9HCJ3 691 aaKnown RBP12.89□□□□□ -0.35
SMAD1-215ENST00000515385 MAP3K20Q9NYL2 800 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms