RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 ENC1O14682 589 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 FPGTO14772 594 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 MFSD11O43934 449 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 MAFKO60675 156 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 TM7SF2O76062 418 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 LDOC1O95751 146 aaPredicted RBP13.18□□□□□ -0.3
CDK7-212ENST00000515180 IGFALSP35858 605 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 CSNK1DP48730 415 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 CLDN6P56747 220 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 MAXP61244 160 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 FZD2Q14332 565 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 INAVAQ3KP66 663 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 CFAP58Q5T655 872 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 TMCO4Q5TGY1 634 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 KYAT3Q6YP21 454 aaKnown RBP13.18□□□□□ -0.3
CDK7-212ENST00000515180 PAF1Q8N7H5 531 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 KCTD6Q8NC69 237 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 PCDH19Q8TAB3 1148 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 GATA6Q92908 595 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 CENPTQ96BT3 561 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 LENG8Q96PV6 779 aaPredicted RBP13.18□□□□□ -0.3
CDK7-212ENST00000515180 PSKH2Q96QS6 385 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 TUBGCP5Q96RT8 1024 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 DNAJC28Q9NX36 388 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 SEPT3Q9UH03 358 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 MSRB2Q9Y3D2 182 aa13.18□□□□□ -0.3
CDK7-212ENST00000515180 TPRP12270 2363 aaKnown RBP13.17□□□□□ -0.3
CDK7-212ENST00000515180 PLXNB3Q9ULL4 1909 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 TRIM38O00635 465 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 RIOK3O14730 519 aaKnown RBP13.17□□□□□ -0.3
CDK7-212ENST00000515180 FFAR2O15552 330 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 DKK1O94907 266 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 MYF5P13349 255 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 DGKAP23743 735 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 SERPINA4P29622 427 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 PFN3P60673 137 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 BCL2L1Q07817 233 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 PDE1CQ14123 709 aaPredicted RBP13.17□□□□□ -0.3
CDK7-212ENST00000515180 ZNF235Q14590 738 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 RFTN1Q14699 578 aaPredicted RBP13.17□□□□□ -0.3
CDK7-212ENST00000515180 GRM3Q14832 879 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 ST3GAL2Q16842 350 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 ANKRD20A8PQ5CZ79 823 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 FAM182AQ5T1J6 154 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 ZFYVE27Q5T4F4 411 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 NCBP2-AS2Q69YL0 99 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 SARM1Q6SZW1 724 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 DHRS13Q6UX07 377 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 ATPAF2Q8N5M1 289 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 TP53I13Q8NBR0 393 aaPredicted RBP13.17□□□□□ -0.3
CDK7-212ENST00000515180 HCAR2Q8TDS4 363 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 ASB12Q8WXK4 309 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 RAPGEF5Q92565 580 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 ZNF641Q96N77 438 aaPredicted RBP13.17□□□□□ -0.3
CDK7-212ENST00000515180 ZNF599Q96NL3 588 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 ATP13A3Q9H7F0 1226 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 GPR27Q9NS67 375 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 KLF15Q9UIH9 416 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 HYOU1Q9Y4L1 999 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 PCDHGC4Q9Y5F7 938 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 PTPRBP23467 1997 aa13.17□□□□□ -0.3
CDK7-212ENST00000515180 ARID1BQ8NFD5 2236 aaPredicted RBP13.16□□□□□ -0.3
CDK7-212ENST00000515180 SPTY2D1-AS1A0A0U1RR47 76 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 FAM149AA5PLN7 773 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 TRAFD1O14545 582 aaPredicted RBP13.16□□□□□ -0.3
CDK7-212ENST00000515180 SIGLEC6O43699 453 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 PIAS2O75928 621 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 NEBLO76041 1014 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 PROS1P07225 676 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 GIMD1P0DJR0 217 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 C6P13671 934 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 CR2P20023 1033 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 SERPINB6P35237 376 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 RABIFP47224 123 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 LIG3P49916 1009 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 RENBPP51606 427 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 NSUN2Q08J23 767 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDK7-212ENST00000515180 ELP6Q0PNE2 266 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 RALGDSQ12967 914 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 EIF2B5Q13144 721 aaKnown RBP13.16□□□□□ -0.3
CDK7-212ENST00000515180 PAFAH1B3Q15102 231 aaKnown RBP13.16□□□□□ -0.3
CDK7-212ENST00000515180 PTPRRQ15256 657 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 IRF4Q15306 451 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 WSCD2Q2TBF2 565 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 BRAT1Q6PJG6 821 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 NYAP1Q6ZVC0 841 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 GAS2L3Q86XJ1 694 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 CNGA4Q8IV77 575 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDK7-212ENST00000515180 PQLC3Q8N755 202 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 TC2NQ8N9U0 490 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 DENND6BQ8NEG7 585 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 ECHDC3Q96DC8 303 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 TCEAL2Q9H3H9 227 aaPredicted RBP13.16□□□□□ -0.3
CDK7-212ENST00000515180 NOD2Q9HC29 1040 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 NT5MQ9NPB1 228 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 SCUBE2Q9NQ36 999 aa13.16□□□□□ -0.3
CDK7-212ENST00000515180 RCOR3Q9P2K3 495 aaPredicted RBP13.16□□□□□ -0.3
CDK7-212ENST00000515180 PNMA8BQ9ULN7 279 aaPredicted RBP13.16□□□□□ -0.3
CDK7-212ENST00000515180 TFR2Q9UP52 801 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms