RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 BCL2L1Q07817 233 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 SLC10A7Q0GE19 358 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 ZNF235Q14590 738 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 ASTE1Q2TB18 679 aaPredicted RBP24.72■■□□□ 1.55
SNF8-213ENST00000514929 TMEM52BQ4KMG9 183 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 HS1BP3Q53T59 392 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 ZNF542PQ5EBM4 170 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 TMPRSS7Q7RTY8 843 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 GALNT15Q8N3T1 639 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 ATPAF2Q8N5M1 289 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 TSC1Q92574 1164 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 PSKH2Q96QS6 385 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 PCDH12Q9NPG4 1184 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 GPR27Q9NS67 375 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 RCOR3Q9P2K3 495 aaPredicted RBP24.72■■□□□ 1.55
SNF8-213ENST00000514929 PCDHGA1Q9Y5H4 931 aa24.72■■□□□ 1.55
SNF8-213ENST00000514929 SPTY2D1-AS1A0A0U1RR47 76 aa24.71■■□□□ 1.55
SNF8-213ENST00000514929 MFAP3LO75121 409 aa24.71■■□□□ 1.55
SNF8-213ENST00000514929 ADKP55263 362 aaKnown RBP24.71■■□□□ 1.55
SNF8-213ENST00000514929 PDE1CQ14123 709 aaPredicted RBP24.71■■□□□ 1.55
SNF8-213ENST00000514929 FZD2Q14332 565 aa24.71■■□□□ 1.55
SNF8-213ENST00000514929 DHRS13Q6UX07 377 aa24.71■■□□□ 1.55
SNF8-213ENST00000514929 CCNI2Q6ZMN8 369 aaPredicted RBP24.71■■□□□ 1.55
SNF8-213ENST00000514929 PARGQ86W56 976 aa24.71■■□□□ 1.55
SNF8-213ENST00000514929 SLC25A45Q8N413 288 aa24.71■■□□□ 1.55
SNF8-213ENST00000514929 KDF1Q8NAX2 398 aaPredicted RBP24.71■■□□□ 1.55
SNF8-213ENST00000514929 CENPTQ96BT3 561 aa24.71■■□□□ 1.55
SNF8-213ENST00000514929 UCKL1Q9NWZ5 548 aa24.71■■□□□ 1.55
SNF8-213ENST00000514929 LCMT1Q9UIC8 334 aa24.71■■□□□ 1.55
SNF8-213ENST00000514929 MUSKO15146 869 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 FFAR2O15552 330 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 PIAS2O75928 621 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 CD48P09326 243 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 TMEM253P0C7T8 217 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 IGFALSP35858 605 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 THOP1P52888 689 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 PFN3P60673 137 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 AP1S1P61966 158 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 HNRNPKP61978 463 aaKnown RBP eCLIP24.7■■□□□ 1.54
SNF8-213ENST00000514929 MMRN1Q13201 1228 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 KDM7AQ6ZMT4 941 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 CPNE8Q86YQ8 564 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 BBS5Q8N3I7 341 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 NSMCE1Q8WV22 266 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 CCDC42Q96M95 316 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 CHP1Q99653 195 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 ATP8A1Q9Y2Q0 1164 aa24.7■■□□□ 1.54
SNF8-213ENST00000514929 H3BM21 787 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 RIOK3O14730 519 aaKnown RBP24.69■■□□□ 1.54
SNF8-213ENST00000514929 MAFKO60675 156 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 RFPL3O75679 317 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 C1SP09871 688 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 IL4RP24394 825 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 ACADVLP49748 655 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 ATP13A4Q4VNC1 1196 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 ZSWIM9Q86XI8 627 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 KCTD6Q8NC69 237 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 FAM71BQ8TC56 605 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 ZCCHC14Q8WYQ9 949 aaKnown RBP24.69■■□□□ 1.54
SNF8-213ENST00000514929 CAAP1Q9H8G2 361 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 NHEJ1Q9H9Q4 299 aaPredicted RBP24.69■■□□□ 1.54
SNF8-213ENST00000514929 COQ6Q9Y2Z9 468 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 PTPRBP23467 1997 aa24.69■■□□□ 1.54
SNF8-213ENST00000514929 NEMP2A6NFY4 417 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 TMEM110-MUSTN1A8MSY1 372 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 TRIM38O00635 465 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 SIGLEC6O43699 453 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 CSF2P04141 144 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 PRKCGP05129 697 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 ALPPL2P10696 532 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 CDK4P11802 303 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 C6P13671 934 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 CKMT2P17540 419 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 HSPA9P38646 679 aaKnown RBP24.68■■□□□ 1.54
SNF8-213ENST00000514929 MMP12P39900 470 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 YPEL5P62699 121 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 POLR2LP62875 67 aaKnown RBP24.68■■□□□ 1.54
SNF8-213ENST00000514929 SEMG2Q02383 582 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 ZNF211Q13398 564 aaPredicted RBP24.68■■□□□ 1.54
SNF8-213ENST00000514929 DPYSL3Q14195 570 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 PTK2BQ14289 1009 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 SMAD1Q15797 465 aaKnown RBP24.68■■□□□ 1.54
SNF8-213ENST00000514929 ZFYVE27Q5T4F4 411 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 CNGA4Q8IV77 575 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 TP53I13Q8NBR0 393 aaPredicted RBP24.68■■□□□ 1.54
SNF8-213ENST00000514929 OR4C6Q8NH72 309 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 ECHDC3Q96DC8 303 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 MBNL1Q9NR56 388 aaKnown RBP24.68■■□□□ 1.54
SNF8-213ENST00000514929 SPTLC3Q9NUV7 552 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 ZMIZ1Q9ULJ6 1067 aa24.68■■□□□ 1.54
SNF8-213ENST00000514929 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.67■■□□□ 1.54
SNF8-213ENST00000514929 LZTS3O60299 673 aaPredicted RBP24.67■■□□□ 1.54
SNF8-213ENST00000514929 PEX11BO96011 259 aa24.67■■□□□ 1.54
SNF8-213ENST00000514929 KRT7P08729 469 aa24.67■■□□□ 1.54
SNF8-213ENST00000514929 NME1P15531 152 aaKnown RBP24.67■■□□□ 1.54
SNF8-213ENST00000514929 LIG3P49916 1009 aa24.67■■□□□ 1.54
SNF8-213ENST00000514929 ARSEP51690 589 aa24.67■■□□□ 1.54
SNF8-213ENST00000514929 TAS2R40P59535 323 aa24.67■■□□□ 1.54
SNF8-213ENST00000514929 MESDQ14696 234 aa24.67■■□□□ 1.54
SNF8-213ENST00000514929 LRRC14Q15048 493 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms