RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 PHOSPHO2Q8TCD6 241 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 JPH3Q8WXH2 748 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 NKD2Q969F2 451 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ZFRQ96KR1 1074 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 CDK5RAP1Q96SZ6 601 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 CDADC1Q9BWV3 514 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 C1QTNF7Q9BXJ2 289 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ELOVL4Q9GZR5 314 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 EBF3Q9H4W6 596 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 PDZD7Q9H5P4 517 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 CYP4F11Q9HBI6 524 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 AFF4Q9UHB7 1163 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 HAO1Q9UJM8 370 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 NUP50Q9UKX7 468 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 DIMT1Q9UNQ2 313 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 DRG1Q9Y295 367 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TMEM120BA0PK00 339 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 STX16-NPEPL1H3BU86 382 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 MEN1O00255 615 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TSPAN4O14817 238 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 HBP1O60381 514 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ITGAVP06756 1048 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ABHD2P08910 425 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TTKP33981 857 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 CHN2P52757 468 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 GDF10P55107 478 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 SELENBP1Q13228 472 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 KRT81Q14533 505 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 UGP2Q16851 508 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF829Q3KNS6 432 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 OR7E24Q6IFN5 339 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 CYP4F22Q6NT55 531 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TAPT1Q6NXT6 567 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 DCUN1D2Q6PH85 259 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ATAD1Q8NBU5 361 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 PIK3C3Q8NEB9 887 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ST13P5Q8NFI4 369 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 RBM15Q96T37 977 aaKnown RBP eCLIP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 STMN4Q9H169 189 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 LIN28AQ9H9Z2 209 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 POLE3Q9NRF9 147 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 STX18Q9P2W9 335 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 NXF1Q9UBU9 619 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 RSL24D1Q9UHA3 163 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 CLEC4AQ9UMR7 237 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 VWA7Q9Y334 891 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 MRPL42Q9Y6G3 142 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 PITPNM1O00562 1244 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 KPNA4O00629 521 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 PDPK1O15530 556 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 BRINP1O60477 761 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 CILPO75339 1184 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 PIAS1O75925 651 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 IL18RAPO95256 599 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TGDSO95455 350 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TNNC2P02585 160 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 CD48P09326 243 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 MYL4P12829 197 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 CASP2P42575 452 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 MAGEA4P43358 317 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 CAPZA2P47755 286 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 GABRB2P47870 512 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 NPY2RP49146 381 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ERVK-21P61565 698 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ECT2LQ008S8 904 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TFDP1Q14186 410 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 SMTNL2Q2TAL5 461 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 IQSEC1Q6DN90 963 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TRNP1Q6NT89 227 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 FAM171BQ6P995 826 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 DCLRE1AQ6PJP8 1040 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 XKR5Q6UX68 686 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TTC7BQ86TV6 843 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 NPAS4Q8IUM7 802 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TBC1D19Q8N5T2 526 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ASCC1Q8N9N2 400 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 ICA1LQ8NDH6 482 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 FNIP1Q8TF40 1166 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 SEPT8Q92599 483 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 SGF29Q96ES7 293 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 WDR83Q9BRX9 315 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TMEM121Q9BTD3 319 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TMUB1Q9BVT8 246 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 KATNBL1Q9H079 304 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TRIT1Q9H3H1 467 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 OSGEPL1Q9H4B0 414 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 TRIM45Q9H8W5 580 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 KLHL14Q9P2G3 628 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 SAE1Q9UBE0 346 aaPredicted RBP7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 DAPK2Q9UIK4 370 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 GNPTGQ9UJJ9 305 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 MAN2B2Q9Y2E5 1009 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 WASF2Q9Y6W5 498 aa7.54□□□□□ -1.2
PDLIM5-219ENST00000514743 A0A087WZ62 844 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 TEX51A0A1B0GUA7 166 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 NIPSNAP2O75323 286 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 OR7A10O76100 309 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 LGALS2P05162 132 aa7.53□□□□□ -1.2
PDLIM5-219ENST00000514743 TFAP2AP05549 437 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms