RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 UCKL1Q9NWZ5 548 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 CTTNBP2NLQ9P2B4 639 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 RCOR3Q9P2K3 495 aaPredicted RBP23.26■■□□□ 1.31
CLDND1-230ENST00000514537 SEPT3Q9UH03 358 aa23.26■■□□□ 1.31
CLDND1-230ENST00000514537 COL5A1P20908 1838 aaPredicted RBP23.26■■□□□ 1.31
CLDND1-230ENST00000514537 PIAS2O75928 621 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 PROSCO94903 275 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 PEX11BO96011 259 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 C1SP09871 688 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 ACADVLP49748 655 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 ARSEP51690 589 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 CDH6P55285 790 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 SLC10A7Q0GE19 358 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 ZNF211Q13398 564 aaPredicted RBP23.25■■□□□ 1.31
CLDND1-230ENST00000514537 KRT81Q14533 505 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 SMAD1Q15797 465 aaKnown RBP23.25■■□□□ 1.31
CLDND1-230ENST00000514537 ZNF542PQ5EBM4 170 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 TMCO4Q5TGY1 634 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 DHRS13Q6UX07 377 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 ZSWIM9Q86XI8 627 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 GALNT15Q8N3T1 639 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 CTNNBL1Q8WYA6 563 aaPredicted RBP23.25■■□□□ 1.31
CLDND1-230ENST00000514537 ECHDC3Q96DC8 303 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 WRAP53Q9BUR4 548 aaKnown RBP23.25■■□□□ 1.31
CLDND1-230ENST00000514537 ZMIZ1Q9ULJ6 1067 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 WDFY3Q8IZQ1 3526 aa23.25■■□□□ 1.31
CLDND1-230ENST00000514537 FREM2Q5SZK8 3169 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 TRIM38O00635 465 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 RIOK3O14730 519 aaKnown RBP23.24■■□□□ 1.31
CLDND1-230ENST00000514537 SIGLEC6O43699 453 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 MAFKO60675 156 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 CSF2P04141 144 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 CDK4P11802 303 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 CKMT2P17540 419 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 SERPINA4P29622 427 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 SSR1P43307 286 aaKnown RBP23.24■■□□□ 1.31
CLDND1-230ENST00000514537 RENBPP51606 427 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 PDE1CQ14123 709 aaPredicted RBP23.24■■□□□ 1.31
CLDND1-230ENST00000514537 PROX2Q3B8N5 592 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 TPRG1LQ5T0D9 272 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 CFAP58Q5T655 872 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 ERAP2Q6P179 960 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 KDM7AQ6ZMT4 941 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 CPNE8Q86YQ8 564 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 TP53I13Q8NBR0 393 aaPredicted RBP23.24■■□□□ 1.31
CLDND1-230ENST00000514537 NSMCE3Q96MG7 304 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 C1QTNF7Q9BXJ2 289 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 DEF6Q9H4E7 631 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 ABHD10Q9NUJ1 306 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 DNAJC28Q9NX36 388 aa23.24■■□□□ 1.31
CLDND1-230ENST00000514537 RFPL3O75679 317 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 CAPNS1P04632 268 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 CD48P09326 243 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 TPM1P09493 284 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 GIMD1P0DJR0 217 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 NME1P15531 152 aaKnown RBP23.23■■□□□ 1.31
CLDND1-230ENST00000514537 SERPINB6P35237 376 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 IGFALSP35858 605 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 SCNN1BP51168 640 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 AP1S1P61966 158 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 HNRNPKP61978 463 aaKnown RBP eCLIP23.23■■□□□ 1.31
CLDND1-230ENST00000514537 BCL2L1Q07817 233 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 MMRN1Q13201 1228 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 TSR1Q2NL82 804 aaKnown RBP23.23■■□□□ 1.31
CLDND1-230ENST00000514537 ATP13A4Q4VNC1 1196 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 PARGQ86W56 976 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 OR4C6Q8NH72 309 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 CHP1Q99653 195 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 MBNL1Q9NR56 388 aaKnown RBP23.23■■□□□ 1.31
CLDND1-230ENST00000514537 LCMT1Q9UIC8 334 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 ATP8A1Q9Y2Q0 1164 aa23.23■■□□□ 1.31
CLDND1-230ENST00000514537 TRAFD1O14545 582 aaPredicted RBP23.22■■□□□ 1.31
CLDND1-230ENST00000514537 TOR1BO14657 336 aa23.22■■□□□ 1.31
CLDND1-230ENST00000514537 AKR1B10O60218 316 aa23.22■■□□□ 1.31
CLDND1-230ENST00000514537 MFAP3LO75121 409 aa23.22■■□□□ 1.31
CLDND1-230ENST00000514537 KRT37O76014 449 aa23.22■■□□□ 1.31
CLDND1-230ENST00000514537 TMEM253P0C7T8 217 aa23.22■■□□□ 1.31
CLDND1-230ENST00000514537 ADKP55263 362 aaKnown RBP23.22■■□□□ 1.31
CLDND1-230ENST00000514537 YPEL5P62699 121 aa23.22■■□□□ 1.31
CLDND1-230ENST00000514537 ZCCHC14Q8WYQ9 949 aaKnown RBP23.22■■□□□ 1.31
CLDND1-230ENST00000514537 KLF15Q9UIH9 416 aa23.22■■□□□ 1.31
CLDND1-230ENST00000514537 DMXL2Q8TDJ6 3036 aa23.22■■□□□ 1.31
CLDND1-230ENST00000514537 KNTC1P50748 2209 aa23.22■■□□□ 1.31
CLDND1-230ENST00000514537 ZZEF1O43149 2961 aa23.22■■□□□ 1.31
CLDND1-230ENST00000514537 CFAP69A5D8W1 941 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 SCAMP1O15126 338 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 PRKCGP05129 697 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 C6P13671 934 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 CR2P20023 1033 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 ACP1P24666 158 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 HSPA9P38646 679 aaKnown RBP23.21■■□□□ 1.31
CLDND1-230ENST00000514537 MMP12P39900 470 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 LIG3P49916 1009 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 TAS2R40P59535 323 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 EIF2B5Q13144 721 aaKnown RBP23.21■■□□□ 1.31
CLDND1-230ENST00000514537 ILKQ13418 452 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 DPYSL3Q14195 570 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 PTK2BQ14289 1009 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 ZNF235Q14590 738 aa23.21■■□□□ 1.31
CLDND1-230ENST00000514537 AGERQ15109 404 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms