RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 PKP3Q9Y446 797 aa11.33□□□□□ -0.6
TCOF1-211ENST00000513346 TFEBP19484 476 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 RPS9P46781 194 aaKnown RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 PURAQ00577 322 aaKnown RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 EFEMP1Q12805 493 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 TRIM32Q13049 653 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 TAB1Q15750 504 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 C15orf59Q2T9L4 293 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 SYTL3Q4VX76 610 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 ZNF470Q6ECI4 717 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 KLHL17Q6TDP4 642 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 SAPCD2Q86UD0 394 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 TMEM161BQ8NDZ6 487 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 C12orf43Q96C57 262 aaKnown RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 MFSD14AQ96MC6 490 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 DIABLOQ9NR28 239 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 DMAC2Q9NW81 257 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 RAPGEFL1Q9UHV5 662 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 TSPAN16Q9UKR8 245 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 LRP6O75581 1613 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 ERI2A8K979 691 aaKnown RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 SYNCRIPO60506 623 aaKnown RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 MBL2P11226 248 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 KLRC2P26717 231 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 CCT3P49368 545 aaKnown RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 SEPHS1P49903 392 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 TKTL1P51854 596 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 CDH8P55286 799 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 CDH15P55291 814 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 TP53BP2Q13625 1128 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 NR6A1Q15406 480 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 PTRHD1Q6GMV3 140 aaKnown RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 KLHL35Q6PF15 583 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 RRM2BQ7LG56 351 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 PSTKQ8IV42 348 aaKnown RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 RAB42Q8N4Z0 105 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 FNDC5Q8NAU1 212 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 MTMR14Q8NCE2 650 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 ZNF540Q8NDQ6 660 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 FBXO30Q8TB52 745 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 KCTD4Q8WVF5 259 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 FOPNLQ96NB1 174 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 CINPQ9BW66 212 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 CDHR5Q9HBB8 845 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 VAV3Q9UKW4 847 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 KCNU1A8MYU2 1149 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 J3QRK9 145 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 FBP2O00757 339 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 PAPSS1O43252 624 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 C2P06681 752 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 PSMB4P28070 264 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 AXLP30530 894 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 SLC26A3P40879 764 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 SPIRE1Q08AE8 756 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 MYLK3Q32MK0 819 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 LSM12Q3MHD2 195 aaKnown RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 ANKS6Q68DC2 871 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 CCDC149Q6ZUS6 474 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 AADATQ8N5Z0 425 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 VPS37AQ8NEZ2 397 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 FBXL8Q96CD0 374 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 CITED4Q96RK1 184 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 PORCNQ9H237 461 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 FAIMQ9NVQ4 179 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 LEF1Q9UJU2 399 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 PADI4Q9UM07 663 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 PCDHA2Q9Y5H9 948 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 KCPQ6ZWJ8 1503 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 SLC12A8A0AV02 714 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 BBIP1A8MTZ0 92 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 M0R2N6 131 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 XRCC1P18887 633 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 CHRM3P20309 590 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 THOP1P52888 689 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 COPZ1P61923 177 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 GNA12Q03113 381 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 ZNF423Q2M1K9 1284 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 KLHL12Q53G59 568 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 CELF3Q5SZQ8 465 aaKnown RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 XKR5Q6UX68 686 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 TREML1Q86YW5 311 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 SPPL2CQ8IUH8 684 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 TMEM126BQ8IUX1 230 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 ZNF781Q8N8C0 355 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 FAM156AQ8NDB6 213 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 ZFP28Q8NHY6 868 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 UTP4Q969X6 686 aaKnown RBP11.32□□□□□ -0.6
TCOF1-211ENST00000513346 OMDQ99983 421 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 IL22Q9GZX6 179 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 XPR1Q9UBH6 696 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 PRELID1Q9Y255 219 aa11.32□□□□□ -0.6
TCOF1-211ENST00000513346 CCDC182A6NF36 153 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 LACTBL1A8MY62 500 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-211ENST00000513346 SLC22A2O15244 555 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 CLCN2P51788 898 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 ECT2LQ008S8 904 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 SLC18A2Q05940 514 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 MAP2K5Q13163 448 aa11.31□□□□□ -0.6
TCOF1-211ENST00000513346 C1DQ13901 141 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms