RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TIGD7Q6NT04 549 aaPredicted RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 C11orf87Q6NUJ2 197 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 TRMT11Q7Z4G4 463 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 USP37Q86T82 979 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 XYLT1Q86Y38 959 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 PHYKPLQ8IUZ5 450 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 AFAP1L2Q8N4X5 818 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 FRMD1Q8N878 549 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 IL17RCQ8NAC3 791 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 PDPRQ8NCN5 879 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 MCPH1Q8NEM0 835 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 CADM4Q8NFZ8 388 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 RLN3Q8WXF3 142 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 MRPS31Q92665 395 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 TSPAN18Q96SJ8 248 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 PNKPQ96T60 521 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 NAP1L4Q99733 375 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 HSD17B14Q9BPX1 270 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 LXNQ9BS40 222 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 POLR3CQ9BUI4 534 aaPredicted RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 CCDC94Q9BW85 323 aaPredicted RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 IL25Q9H293 177 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 CXCL16Q9H2A7 254 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 IFT22Q9H7X7 185 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 TMEM206Q9H813 350 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 TTC12Q9H892 705 aaPredicted RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 KCNMB3Q9NPA1 279 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 TM7SF3Q9NS93 570 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 DUS2Q9NX74 493 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 BCCIPQ9P287 314 aaKnown RBP eCLIP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 TNFSF13BQ9Y275 285 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 GDAQ9Y2T3 454 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 SPO11Q9Y5K1 396 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 HELZP42694 1942 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 PHLPP2Q6ZVD8 1323 aa3.91□□□□□ -1.78
PDLIM5-218ENST00000513341 MGAQ8IWI9 3026 aa3.9□□□□□ -1.78
PDLIM5-218ENST00000513341 CABIN1Q9Y6J0 2220 aa3.9□□□□□ -1.78
PDLIM5-218ENST00000513341 MYO18AQ92614 2054 aaKnown RBP3.9□□□□□ -1.78
PDLIM5-218ENST00000513341 CREBBPQ92793 2442 aa3.9□□□□□ -1.78
PDLIM5-218ENST00000513341 MTMR11A4FU01 709 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 LRRIQ4A6NIV6 560 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 K7ERI5 159 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 SGK1O00141 431 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 SLC9A3R1O14745 358 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 TLX3O43711 291 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 PCDHGA12O60330 932 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 ULK1O75385 1050 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 SEC24DO94855 1032 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 LY86O95711 162 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 AFPP02771 609 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 APODP05090 189 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 ARSAP15289 507 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 GCFC2P16383 781 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 BPIP17213 487 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 CYP3A5P20815 502 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 KRTAP5-9P26371 169 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 CHMLP26374 656 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 CCKBRP32239 447 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 OPRD1P41143 372 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 MATKP42679 507 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 GRK6P43250 576 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 NAMPTP43490 491 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 CCR10P46092 362 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 IFNAR2P48551 515 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 AARSP49588 968 aaKnown RBP eCLIP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 PDE6CP51160 858 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 ZNF132P52740 706 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 TMPRSS3P57727 454 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 IL2P60568 153 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 CXADRP78310 365 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 MRPS35P82673 323 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 EXOSC10Q01780 885 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 AKAP17AQ02040 695 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 CD69Q07108 199 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 MTF1Q14872 753 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 SEPT7Q16181 437 aaKnown RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 AGAP9Q5VTM2 703 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 BROXQ5VW32 411 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 TMEM150AQ86TG1 271 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 CHD1LQ86WJ1 897 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 SLC41A1Q8IVJ1 513 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 TPH2Q8IWU9 490 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 LSMEM2Q8N112 164 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 CCDC33Q8N5R6 958 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 ALLCQ8N6M5 410 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 MAB21L3Q8N8X9 362 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 TRIML1Q8N9V2 468 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 ZNF248Q8NDW4 579 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 OR2I1PQ8NGU4 316 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 SPPL2BQ8TCT7 592 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 HMGB4Q8WW32 186 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 GJA10Q969M2 543 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 ZBTB9Q96C00 473 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 ACAP3Q96P50 834 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 RNF26Q9BY78 433 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 DPH1Q9BZG8 443 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 RWDD1Q9H446 243 aaPredicted RBP3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 GAREM1Q9H706 876 aa3.9□□□□□ -1.79
PDLIM5-218ENST00000513341 PLEKHA5Q9HAU0 1116 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms