RNA–Protein interactions for RNA: ENST00000512878.1

RHOBTB3-213, Transcript of Rho related BTB domain containing 3, humanhuman

TSL 2

Gene RHOBTB3, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOBTB3-213ENST00000512878 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.94□□□□□ -0.34
RHOBTB3-213ENST00000512878 SPTY2D1-AS1A0A0U1RR47 76 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 TMEM8BA6NDV4 472 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 DFFAO00273 331 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 MMP20O60882 483 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 PALMO75781 387 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 PIAS2O75928 621 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 LDOC1O95751 146 aaPredicted RBP12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 DGKAP23743 735 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 CSNK1DP48730 415 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 ACADVLP49748 655 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 ARSEP51690 589 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 PFN3P60673 137 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 CAMK2BQ13554 666 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 FZD2Q14332 565 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 SMAD1Q15797 465 aaKnown RBP12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 SLC18A3Q16572 532 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 UGP2Q16851 508 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 SPECC1LQ69YQ0 1117 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 CAMK1DQ8IU85 385 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 VSTM4Q8IW00 320 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 LZTR1Q8N653 840 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 DENND6BQ8NEG7 585 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 ZNF564Q8TBZ8 553 aaPredicted RBP12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 HCAR2Q8TDS4 363 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 ZNF641Q96N77 438 aaPredicted RBP12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 IP6K2Q9UHH9 426 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 IPO11Q9UI26 975 aaKnown RBP12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 KLF15Q9UIH9 416 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 PNMA8BQ9ULN7 279 aaPredicted RBP12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 PCDHGA1Q9Y5H4 931 aa12.93□□□□□ -0.34
RHOBTB3-213ENST00000512878 BPTFQ12830 3046 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 H3BRJ5 948 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 MYO1FO00160 1098 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 NEMP1O14524 444 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 TRAFD1O14545 582 aaPredicted RBP12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 FFAR2O15552 330 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 MAFKO60675 156 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 TPM3P06753 285 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 CD48P09326 243 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 IGFALSP35858 605 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 ARL4AP40617 200 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 RABIFP47224 123 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 NSUN2Q08J23 767 aaKnown RBP eCLIP12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 SLC10A7Q0GE19 358 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 SGCGQ13326 291 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 RFTN1Q14699 578 aaPredicted RBP12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 GRM3Q14832 879 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 PROX2Q3B8N5 592 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 TMEM52BQ4KMG9 183 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 ATP13A4Q4VNC1 1196 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 SRLQ86TD4 932 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 PROSER1Q86XN7 944 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 DCP2Q8IU60 420 aaKnown RBP12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 TP53I13Q8NBR0 393 aaPredicted RBP12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 OR8K1Q8NGG5 319 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 ECHDC3Q96DC8 303 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 PSKH2Q96QS6 385 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 TUBGCP5Q96RT8 1024 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 WRAP53Q9BUR4 548 aaKnown RBP12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 TSPY26PQ9H489 355 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 SP110Q9HB58 689 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 PCDH12Q9NPG4 1184 aa12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 MBNL1Q9NR56 388 aaKnown RBP12.92□□□□□ -0.34
RHOBTB3-213ENST00000512878 SSU72P8A0A1W2PR75 194 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 TRABD2BA6NFA1 517 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 RIOK3O14730 519 aaKnown RBP12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 FPGTO14772 594 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 CBFA2T2O43439 604 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 SIGLEC6O43699 453 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 TM7SF2O76062 418 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 CSF2P04141 144 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 NME1P15531 152 aaKnown RBP12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 CR2P20023 1033 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 MMP12P39900 470 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 SUOXP51687 545 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 SEMG2Q02383 582 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 EIF2B5Q13144 721 aaKnown RBP12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 MMRN1Q13201 1228 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 TRIM14Q14142 442 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 TMCO4Q5TGY1 634 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 BRAT1Q6PJG6 821 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 TMCO3Q6UWJ1 677 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 NYAP1Q6ZVC0 841 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 PGBD5Q8N414 524 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 RNF214Q8ND24 703 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 OR4C6Q8NH72 309 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 CXorf40AQ8TE69 158 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 ZNF599Q96NL3 588 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 CHP1Q99653 195 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 CINPQ9BW66 212 aaPredicted RBP12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 ABHD10Q9NUJ1 306 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 COQ6Q9Y2Z9 468 aa12.91□□□□□ -0.34
RHOBTB3-213ENST00000512878 SCN8AQ9UQD0 1980 aa12.9□□□□□ -0.34
RHOBTB3-213ENST00000512878 LY6G6EA0A0G2JKS1 128 aa12.9□□□□□ -0.34
RHOBTB3-213ENST00000512878 TTC24A2A3L6 582 aaPredicted RBP12.9□□□□□ -0.34
RHOBTB3-213ENST00000512878 MFAP3LO75121 409 aa12.9□□□□□ -0.34
RHOBTB3-213ENST00000512878 RFPL3O75679 317 aa12.9□□□□□ -0.34
RHOBTB3-213ENST00000512878 NEBLO76041 1014 aa12.9□□□□□ -0.34
RHOBTB3-213ENST00000512878 PROSCO94903 275 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms