RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 MYLK3Q32MK0 819 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 COBLL1Q53SF7 1204 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 OGFOD3Q6PK18 319 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 DRC7Q8IY82 874 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 CACNA2D3Q8IZS8 1091 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 SPATA20Q8TB22 786 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 CEP63Q96MT8 703 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 WDR92Q96MX6 357 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 RBM15Q96T37 977 aaKnown RBP eCLIP12.7□□□□□ -0.383e-7■□□□□ 10.7
DDX41-215ENST00000512431 NPY6RQ99463 290 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 APOOQ9BUR5 198 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 ZYG11BQ9C0D3 744 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 DPEP2Q9H4A9 486 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 TMPRSS4Q9NRS4 437 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.7□□□□□ -0.38
DDX41-215ENST00000512431 PLEKHB1Q9UF11 243 aaPredicted RBP12.7□□□□□ -0.38
DDX41-215ENST00000512431 FLNCQ14315 2725 aa12.7□□□□□ -0.38
DDX41-215ENST00000512431 TRIM49BA6NDI0 452 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 B4DGG1 531 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 GSRP00390 522 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 UGT1A3P35503 534 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 PMS1P54277 932 aaKnown RBP12.69□□□□□ -0.38
DDX41-215ENST00000512431 RNASE9P60153 205 aaKnown RBP12.69□□□□□ -0.38
DDX41-215ENST00000512431 KRT85P78386 507 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 ELP6Q0PNE2 266 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 KLRB1Q12918 225 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 BIRC2Q13490 618 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 INPP5AQ14642 412 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 CLPPQ16740 277 aaPredicted RBP12.69□□□□□ -0.38
DDX41-215ENST00000512431 AMZ1Q400G9 498 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 LACTB2Q53H82 288 aaPredicted RBP12.69□□□□□ -0.38
DDX41-215ENST00000512431 EFHC2Q5JST6 749 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 LRRC73Q5JTD7 316 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 OLFML1Q6UWY5 402 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 ENOSF1Q7L5Y1 443 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 SLC26A9Q7LBE3 791 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 IRF2BP1Q8IU81 584 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 ZDHHC17Q8IUH5 632 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 WDTC1Q8N5D0 677 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 KIAA1524Q8TCG1 905 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 APOBEC4Q8WW27 367 aaKnown RBP12.69□□□□□ -0.38
DDX41-215ENST00000512431 KIAA1143Q96AT1 154 aaPredicted RBP12.69□□□□□ -0.38
DDX41-215ENST00000512431 EFHD1Q9BUP0 239 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 RDH14Q9HBH5 336 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 ANLNQ9NQW6 1124 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 PCDHGA3Q9Y5H0 932 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 ACTL7AQ9Y615 435 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 DGKBQ9Y6T7 804 aa12.69□□□□□ -0.38
DDX41-215ENST00000512431 RHPN2P1A8MT19 583 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 PSMA7O14818 248 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 AGFG2O95081 481 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 FGF3P11487 239 aaPredicted RBP12.68□□□□□ -0.38
DDX41-215ENST00000512431 KELP23276 732 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 ALDH4A1P30038 563 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 SUOXP51687 545 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 HLTFQ14527 1009 aaKnown RBP eCLIP12.68□□□□□ -0.38
DDX41-215ENST00000512431 WSCD2Q2TBF2 565 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 TMPRSS9Q7Z410 1059 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 PASD1Q8IV76 773 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 C1orf131Q8NDD1 294 aaKnown RBP12.68□□□□□ -0.38
DDX41-215ENST00000512431 RCBTB1Q8NDN9 531 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 ZNF397Q8NF99 534 aaPredicted RBP12.68□□□□□ -0.38
DDX41-215ENST00000512431 ARHGEF2Q92974 986 aaKnown RBP12.68□□□□□ -0.38
DDX41-215ENST00000512431 MIB2Q96AX9 1013 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 PGAP3Q96FM1 320 aaPredicted RBP12.68□□□□□ -0.38
DDX41-215ENST00000512431 ABHD17AQ96GS6 310 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 FAM81BQ96LP2 452 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 GSDMAQ96QA5 445 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 DDA1Q9BW61 102 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 ASPSCR1Q9BZE9 553 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 INTS2Q9H0H0 1204 aaKnown RBP12.68□□□□□ -0.38
DDX41-215ENST00000512431 ACP6Q9NPH0 428 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 KCNK4Q9NYG8 393 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 COQ6Q9Y2Z9 468 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 OR1A2Q9Y585 309 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 SCN8AQ9UQD0 1980 aa12.68□□□□□ -0.38
DDX41-215ENST00000512431 TLN1Q9Y490 2541 aaKnown RBP12.67□□□□□ -0.38
DDX41-215ENST00000512431 ZFC3H1O60293 1989 aaKnown RBP12.67□□□□□ -0.38
DDX41-215ENST00000512431 PRR19A6NJB7 356 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 I6L893 689 aaPredicted RBP12.67□□□□□ -0.38
DDX41-215ENST00000512431 CACNB4O00305 520 aaPredicted RBP12.67□□□□□ -0.38
DDX41-215ENST00000512431 MTSS1O43312 755 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 RAD1O60671 282 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 VPS4BO75351 444 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 SMC2O95347 1197 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 CD160O95971 181 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 IGSF6O95976 241 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 ERBB2P04626 1255 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 PCCBP05166 539 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 PRKAR1AP10644 381 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 ITIH2P19823 946 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 CSTF2P33240 577 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDX41-215ENST00000512431 KRT9P35527 623 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 ACVRL1P37023 503 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 CD97P48960 835 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 B4GALNT1Q00973 533 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 PNOCQ13519 176 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 TRA2AQ13595 282 aaKnown RBP eCLIP12.67□□□□□ -0.381e-6■□□□□ 9.3
DDX41-215ENST00000512431 SLC25A52Q3SY17 297 aa12.67□□□□□ -0.38
DDX41-215ENST00000512431 TMEM52BQ4KMG9 183 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms