RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 MFSD5Q6N075 450 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZNF813Q6ZN06 617 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 MACC1Q6ZN28 852 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 STXBP4Q6ZWJ1 553 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 UNC13DQ70J99 1090 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CTU1Q7Z7A3 348 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 KBTBD6Q86V97 674 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 FBXO11Q86XK2 927 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 DDIASQ8IXT1 998 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 HACE1Q8IYU2 909 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZNF679Q8IYX0 411 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ST13P4Q8IZP2 240 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 MB21D1Q8N884 522 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 FAM133AQ8N9E0 248 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 REPS2Q8NFH8 660 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 OR8K1Q8NGG5 319 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 OR14C36Q8NHC7 312 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZDHHC1Q8WTX9 485 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 PDCD6IPQ8WUM4 868 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 THAP4Q8WY91 577 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 PHF21BQ96EK2 531 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 HES6Q96HZ4 224 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 GCNAQ96QF7 691 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 MMP19Q99542 508 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 OSMRQ99650 979 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 SHCBP1LQ9BZQ2 653 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 TM6SF1Q9BZW5 370 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ATP13A3Q9H7F0 1226 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 LIN7BQ9HAP6 207 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 NGBQ9NPG2 151 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 BATF3Q9NR55 127 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 IL37Q9NZH6 218 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 SUSD2Q9UGT4 822 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 SRRDQ9UH36 339 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 RNF112Q9ULX5 631 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZNF510Q9Y2H8 683 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 GPR45Q9Y5Y3 372 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ELP1O95163 1332 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 A0A1W2PPW3 197 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ANKRD34BA5PLL1 514 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 GOLGA8RI6L899 631 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 TK2O00142 265 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 C2CD2LO14523 706 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 FCHO1O14526 889 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CCNT1O60563 726 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 DNAJA2O60884 412 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 HTR3BO95264 441 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ICAM1P05362 532 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 FESP07332 822 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 GALTP07902 379 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CALM1P0DP23 149 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CALM2P0DP24 149 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CALM3P0DP25 149 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ARP10275 920 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 UMPSP11172 480 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 RALBP11234 206 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ETS1P14921 441 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CFL1P23528 166 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 IL32P24001 234 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 PTPN3P26045 913 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 MAP4P27816 1152 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CST5P28325 142 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 AVPR2P30518 371 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 BMPR1AP36894 532 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 MAGEA1P43355 309 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 MECP2P51608 486 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 PNLIPRP1P54315 467 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 TAS2R40P59535 323 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 XIAPP98170 497 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CEBPZQ03701 1054 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 MSLNQ13421 630 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 NONOQ15233 471 aaKnown RBP eCLIP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CHRNA6Q15825 494 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ME3Q16798 604 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CWF19L1Q69YN2 538 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 SLC30A10Q6XR72 485 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 VASH2Q86V25 355 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CCDC25Q86WR0 208 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 KSR1Q8IVT5 923 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 OXR1Q8N573 874 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 AOPEPQ8N6M6 819 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 SYT2Q8N9I0 419 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 EIF1ADQ8N9N8 165 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 POMGNT2Q8NAT1 580 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 KDF1Q8NAX2 398 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 EHBP1Q8NDI1 1231 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 SEPT8Q92599 483 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 SNX27Q96L92 541 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 RAB3IPQ96QF0 476 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 OSBPL9Q96SU4 736 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 PIMREGQ9BSJ6 248 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 MLPHQ9BV36 600 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ACE2Q9BYF1 805 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CCSER1Q9C0I3 900 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 WNT8AQ9H1J5 351 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 SYTL2Q9HCH5 934 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 MRPL47Q9HD33 250 aaKnown RBP5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 ABCB8Q9NUT2 735 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 HCFC1R1Q9NWW0 138 aa5.09□□□□□ -1.59
TRAPPC11-208ENST00000511955 CYP39A1Q9NYL5 469 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms