RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 LIMK2P53671 638 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 ILF2Q12905 390 aaKnown RBP12.99□□□□□ -0.33
HMGB2-205ENST00000511316 KLF10Q13118 480 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 GOLGA7BQ2TAP0 167 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 SV2CQ496J9 727 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 PKDCCQ504Y2 493 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 IRAK1BP1Q5VVH5 260 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 TPGS2Q68CL5 300 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 ZNF280DQ6N043 979 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 BNC2Q6ZN30 1099 aaPredicted RBP12.99□□□□□ -0.33
HMGB2-205ENST00000511316 CNTD1Q8N815 330 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 CERS2Q96G23 380 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 ZCWPW1Q9H0M4 648 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 TCF7L2Q9NQB0 619 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 TMLHEQ9NVH6 421 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 BFARQ9NZS9 450 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 AFF4Q9UHB7 1163 aaKnown RBP12.99□□□□□ -0.33
HMGB2-205ENST00000511316 AP4E1Q9UPM8 1137 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 RAP2CQ9Y3L5 183 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 SNX9Q9Y5X1 595 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 TSC2P49815 1807 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 H3BNX3 289 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 PIK3R2O00459 728 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 ZNF195O14628 629 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 PSMD3O43242 534 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 CAPNS1P04632 268 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 C8AP07357 584 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 SRGAP2BP0DMP2 458 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 HOXA9P31269 272 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 KPNA2P52292 529 aaKnown RBP12.99□□□□□ -0.33
HMGB2-205ENST00000511316 NR1H2P55055 460 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 AQP4P55087 323 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 PRKAA1Q13131 559 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 DPYSQ14117 519 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 MAPRE2Q15555 327 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 CDO1Q16878 200 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 C15orf59Q2T9L4 293 aaPredicted RBP12.99□□□□□ -0.33
HMGB2-205ENST00000511316 SFT2D3Q587I9 215 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 RFX8Q6ZV50 586 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 DPH6Q7L8W6 267 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 C10orf107Q8IVU9 208 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 PGAM4Q8N0Y7 254 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 AFAP1L2Q8N4X5 818 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 ATAD1Q8NBU5 361 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 PDCD6IPQ8WUM4 868 aaKnown RBP12.99□□□□□ -0.33
HMGB2-205ENST00000511316 HSFY1Q96LI6 401 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 PPP1R2P1Q96PQ5 205 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 TWNKQ96RR1 684 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 RBBP8Q99708 897 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 EPAS1Q99814 870 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 C20orf27Q9GZN8 174 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 WDR6Q9NNW5 1121 aaKnown RBP12.99□□□□□ -0.33
HMGB2-205ENST00000511316 ADAMTS6Q9UKP5 1117 aa12.99□□□□□ -0.33
HMGB2-205ENST00000511316 WDFY4Q6ZS81 3184 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 OR6C75A6NL08 312 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 HDAC3O15379 428 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 USP1O94782 785 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 GLDCP23378 1020 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 PEX2P28328 305 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 RPL34P49207 117 aaKnown RBP12.98□□□□□ -0.33
HMGB2-205ENST00000511316 BCAT1P54687 386 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 CDH8P55286 799 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 HDAC4P56524 1084 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 IFRD2Q12894 506 aaPredicted RBP12.98□□□□□ -0.33
HMGB2-205ENST00000511316 MSLNQ13421 630 aaPredicted RBP12.98□□□□□ -0.33
HMGB2-205ENST00000511316 MTM1Q13496 603 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 PPP6R3Q5H9R7 873 aaPredicted RBP12.98□□□□□ -0.33
HMGB2-205ENST00000511316 INTS6LQ5JSJ4 861 aaKnown RBP12.98□□□□□ -0.33
HMGB2-205ENST00000511316 ATAT1Q5SQI0 421 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 CES4AQ5XG92 561 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 ZCCHC23Q6ZST2 131 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 DENND5BQ6ZUT9 1274 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 RTL10Q7L3V2 364 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 TTC9BQ8N6N2 239 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 TOP6BLQ8N6T0 577 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 SLC35F5Q8WV83 523 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 FAR2Q96K12 515 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 ZNF560Q96MR9 790 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 PRICKLE1Q96MT3 831 aaPredicted RBP12.98□□□□□ -0.33
HMGB2-205ENST00000511316 ZNF778Q96MU6 729 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 CSPG4P5Q96PW8 444 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 OXCT2Q9BYC2 517 aaPredicted RBP12.98□□□□□ -0.33
HMGB2-205ENST00000511316 DHX35Q9H5Z1 703 aaKnown RBP12.98□□□□□ -0.33
HMGB2-205ENST00000511316 EFCAB1Q9HAE3 211 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 UTP6Q9NYH9 597 aaKnown RBP12.98□□□□□ -0.33
HMGB2-205ENST00000511316 DSEQ9UL01 958 aa12.98□□□□□ -0.33
HMGB2-205ENST00000511316 MTMR11A4FU01 709 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 MEI4A8MW99 385 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 DLL1O00548 723 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 UGT1A9O60656 530 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 POU2F2P09086 479 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 KCNA4P22459 653 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 PPARGP37231 505 aaPredicted RBP12.97□□□□□ -0.33
HMGB2-205ENST00000511316 NPY2RP49146 381 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 ARPP19P56211 112 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 BST2Q10589 180 aaKnown RBP12.97□□□□□ -0.33
HMGB2-205ENST00000511316 DUSP4Q13115 394 aa12.97□□□□□ -0.33
HMGB2-205ENST00000511316 CYLC2Q14093 348 aaPredicted RBP12.97□□□□□ -0.33
HMGB2-205ENST00000511316 FLOT2Q14254 428 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms