RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 TPM3P06753 285 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 CKMT2P17540 419 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 AMPD1P23109 780 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 EIF4A3P38919 411 aaKnown RBP12.26□□□□□ -0.45
CLDND1-223ENST00000511081 RABIFP47224 123 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 ACADVLP49748 655 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 YPEL5P62699 121 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 ZNF211Q13398 564 aaPredicted RBP12.26□□□□□ -0.45
CLDND1-223ENST00000511081 ILKQ13418 452 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 UGP2Q16851 508 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 TMCO4Q5TGY1 634 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 SPECC1LQ69YQ0 1117 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 BRAT1Q6PJG6 821 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 ARHGAP36Q6ZRI8 547 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 CACTIN-AS1Q8N1I8 211 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 GALNT15Q8N3T1 639 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 OR8K1Q8NGG5 319 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 ECHDC3Q96DC8 303 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 NSMCE3Q96MG7 304 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 CSPG4P5Q96PW8 444 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 MYOCQ99972 504 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 NUP85Q9BW27 656 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 PCDH18Q9HCL0 1135 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 RCOR3Q9P2K3 495 aaPredicted RBP12.26□□□□□ -0.45
CLDND1-223ENST00000511081 DKK4Q9UBT3 224 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 ZMIZ1Q9ULJ6 1067 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 ITM2BQ9Y287 266 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 ACACAQ13085 2346 aa12.26□□□□□ -0.45
CLDND1-223ENST00000511081 LRRK1Q38SD2 2015 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 SSU72P8A0A1W2PR75 194 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 H3BRJ5 948 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 TRIM38O00635 465 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 NEMP1O14524 444 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 RIOK3O14730 519 aaKnown RBP12.25□□□□□ -0.45
CLDND1-223ENST00000511081 MUSKO15146 869 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 CBFA2T2O43439 604 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 MAFKO60675 156 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 MMP20O60882 483 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 CSF2P04141 144 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 CR2P20023 1033 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 ACP1P24666 158 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 ARL4AP40617 200 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 HNRNPKP61978 463 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLDND1-223ENST00000511081 ELP6Q0PNE2 266 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 TRIM14Q14142 442 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 NFKBIBQ15653 356 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 SLC18A3Q16572 532 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 TPRG1LQ5T0D9 272 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 TMPRSS12Q86WS5 348 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 ZSWIM9Q86XI8 627 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 CAMK1DQ8IU85 385 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 LRRC49Q8IUZ0 686 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 FAM181AQ8N9Y4 354 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 TP53I13Q8NBR0 393 aaPredicted RBP12.25□□□□□ -0.45
CLDND1-223ENST00000511081 OR4C6Q8NH72 309 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 BTBD6Q96KE9 485 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 EXOC2Q96KP1 924 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 CALN1Q9BXU9 219 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 UCKL1Q9NWZ5 548 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 KLF15Q9UIH9 416 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 ANAPC7Q9UJX3 599 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 CSNK1G3Q9Y6M4 447 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 APC2O95996 2303 aa12.25□□□□□ -0.45
CLDND1-223ENST00000511081 GOLGA8CPA6NN73 597 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 TAF4O00268 1085 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 DFFAO00273 331 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 TRAFD1O14545 582 aaPredicted RBP12.24□□□□□ -0.45
CLDND1-223ENST00000511081 SCAMP1O15126 338 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 SIGLEC6O43699 453 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 TM7SF2O76062 418 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 PROSCO94903 275 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 PIGNO95427 931 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 NME1P15531 152 aaKnown RBP12.24□□□□□ -0.45
CLDND1-223ENST00000511081 RENBPP51606 427 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 SLC10A7Q0GE19 358 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 EIF2B5Q13144 721 aaKnown RBP12.24□□□□□ -0.45
CLDND1-223ENST00000511081 DNAJC3Q13217 504 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 GSE1Q14687 1217 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 LBRQ14739 615 aaKnown RBP12.24□□□□□ -0.45
CLDND1-223ENST00000511081 SMTNL2Q2TAL5 461 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 TMCO3Q6UWJ1 677 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 DHRS13Q6UX07 377 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 VSTM4Q8IW00 320 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 CBARPQ8N350 705 aaPredicted RBP12.24□□□□□ -0.45
CLDND1-223ENST00000511081 RFFLQ8WZ73 363 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 TBATAQ96M53 351 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 ATP13A3Q9H7F0 1226 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 CAAP1Q9H8G2 361 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 PCDH12Q9NPG4 1184 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 MBNL1Q9NR56 388 aaKnown RBP12.24□□□□□ -0.45
CLDND1-223ENST00000511081 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.24□□□□□ -0.45
CLDND1-223ENST00000511081 UVRAGQ9P2Y5 699 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 SEPT3Q9UH03 358 aa12.24□□□□□ -0.45
CLDND1-223ENST00000511081 ANKRD36A6QL64 1941 aa12.23□□□□□ -0.45
CLDND1-223ENST00000511081 NEMP2A6NFY4 417 aa12.23□□□□□ -0.45
CLDND1-223ENST00000511081 SRRM3A6NNA2 597 aaPredicted RBP12.23□□□□□ -0.45
CLDND1-223ENST00000511081 HTRA2O43464 458 aaPredicted RBP12.23□□□□□ -0.45
CLDND1-223ENST00000511081 SDC3O75056 442 aa12.23□□□□□ -0.45
CLDND1-223ENST00000511081 RFPL3O75679 317 aa12.23□□□□□ -0.45
CLDND1-223ENST00000511081 H2AFZP0C0S5 128 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms