RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TPP1O14773 563 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 MUSKO15146 869 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 LZTS3O60299 673 aaPredicted RBP15.54■□□□□ 0.08
TPM3-219ENST00000509409 RNF8O76064 485 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 MPOP05164 745 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 PAPOLAP51003 745 aaKnown RBP15.54■□□□□ 0.08
TPM3-219ENST00000509409 SUOXP51687 545 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 NDST2P52849 883 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 GABREP78334 506 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 PPARDQ03181 441 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 ACAP1Q15027 740 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 LRRC14Q15048 493 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 TBC1D25Q3MII6 688 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 ANO6Q4KMQ2 910 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 GUSBP11Q6P575 273 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 TP53I13Q8NBR0 393 aaPredicted RBP15.54■□□□□ 0.08
TPM3-219ENST00000509409 SNIP1Q8TAD8 396 aaKnown RBP15.54■□□□□ 0.08
TPM3-219ENST00000509409 HCAR2Q8TDS4 363 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 VOPP1Q96AW1 172 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 NAF1Q96HR8 494 aaKnown RBP15.54■□□□□ 0.08
TPM3-219ENST00000509409 SLC39A8Q9C0K1 460 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 LRRC19Q9H756 370 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 RTN4Q9NQC3 1192 aaKnown RBP15.54■□□□□ 0.08
TPM3-219ENST00000509409 MYO6Q9UM54 1294 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 RAI2Q9Y5P3 530 aa15.54■□□□□ 0.08
TPM3-219ENST00000509409 TDRD6O60522 2096 aaKnown RBP15.54■□□□□ 0.08
TPM3-219ENST00000509409 ITPR1Q14643 2758 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 EME2A4GXA9 379 aaPredicted RBP15.53■□□□□ 0.08
TPM3-219ENST00000509409 LRRC53A6NM62 1247 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 TMEM110-MUSTN1A8MSY1 372 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 DFFAO00273 331 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 RIOK3O14730 519 aaKnown RBP15.53■□□□□ 0.08
TPM3-219ENST00000509409 ATMINO43313 823 aaPredicted RBP15.53■□□□□ 0.08
TPM3-219ENST00000509409 PRPSAP2O60256 369 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 BUB1BO60566 1050 aaPredicted RBP15.53■□□□□ 0.08
TPM3-219ENST00000509409 PRAMEF11O60813 436 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 GCATO75600 419 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 PALMO75781 387 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 FTLP02792 175 aaPredicted RBP15.53■□□□□ 0.08
TPM3-219ENST00000509409 CTSEP14091 401 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 TGM2P21980 687 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 IRF4Q15306 451 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 CA9Q16790 459 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 UGP2Q16851 508 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 ESRP1Q6NXG1 681 aaKnown RBP15.53■□□□□ 0.08
TPM3-219ENST00000509409 CRTC1Q6UUV9 634 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 ENPP7Q6UWV6 458 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 MACC1Q6ZN28 852 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 RD3Q7Z3Z2 195 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 CAMK1DQ8IU85 385 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 HID1Q8IV36 788 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 LSMEM2Q8N112 164 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 TPCN2Q8NHX9 752 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 ZNF578Q96N58 590 aaPredicted RBP15.53■□□□□ 0.08
TPM3-219ENST00000509409 ZNF641Q96N77 438 aaPredicted RBP15.53■□□□□ 0.08
TPM3-219ENST00000509409 LGMNQ99538 433 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 HAUS4Q9H6D7 363 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 PCDH12Q9NPG4 1184 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 GULP1Q9UBP9 304 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 ASXL3Q9C0F0 2248 aa15.53■□□□□ 0.08
TPM3-219ENST00000509409 LMO7DNF2Z398 122 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 YY2O15391 372 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 PRKCGP05129 697 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 C6P13671 934 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 TSHRP16473 764 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 ERCC2P18074 760 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 HTR1BP28222 390 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 LIG3P49916 1009 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 PEX5P50542 639 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 BLKP51451 505 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 TCEA2Q15560 299 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 WSCD2Q2TBF2 565 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 PPP6R3Q5H9R7 873 aaPredicted RBP15.52■□□□□ 0.08
TPM3-219ENST00000509409 PLEKHA7Q6IQ23 1121 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 BRAT1Q6PJG6 821 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 SRLQ86TD4 932 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 SCG3Q8WXD2 468 aaKnown RBP15.52■□□□□ 0.08
TPM3-219ENST00000509409 TSACCQ96A04 125 aaPredicted RBP15.52■□□□□ 0.08
TPM3-219ENST00000509409 BBC3Q96PG8 261 aaPredicted RBP15.52■□□□□ 0.08
TPM3-219ENST00000509409 UBL7Q96S82 380 aaPredicted RBP15.52■□□□□ 0.08
TPM3-219ENST00000509409 KCTD15Q96SI1 283 aaPredicted RBP15.52■□□□□ 0.08
TPM3-219ENST00000509409 SNRNP25Q9BV90 132 aaKnown RBP15.52■□□□□ 0.08
TPM3-219ENST00000509409 CINPQ9BW66 212 aaPredicted RBP15.52■□□□□ 0.08
TPM3-219ENST00000509409 PRORYQ9H606 182 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 ATP13A3Q9H7F0 1226 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 SYNDIG1Q9H7V2 258 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 POLR1BQ9H9Y6 1135 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 SP110Q9HB58 689 aa15.52■□□□□ 0.08
TPM3-219ENST00000509409 CNOT8Q9UFF9 292 aaKnown RBP15.52■□□□□ 0.08
TPM3-219ENST00000509409 TMEM191CA6NGB0 347 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 EIF3CLB5ME19 914 aaKnown RBP15.51■□□□□ 0.07
TPM3-219ENST00000509409 PCCBP05166 539 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 SERPINA4P29622 427 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 MIPP30301 263 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 LSSP48449 732 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 BCL2L1Q07817 233 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 KLHL30Q0D2K2 578 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 INPP5AQ14642 412 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 ELOCQ15369 112 aa15.51■□□□□ 0.07
TPM3-219ENST00000509409 ISXQ2M1V0 245 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms