RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CNTD1Q8N815 330 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 OR2AP1Q8NGE2 309 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 OR8D1Q8WZ84 308 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 PIGKQ92643 395 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 ISG20Q96AZ6 181 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 RNF157Q96PX1 679 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 GORASP1Q9BQQ3 440 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 EDEM2Q9BV94 578 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 CEP41Q9BYV8 373 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 ZDHHC6Q9H6R6 413 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 GRPEL1Q9HAV7 217 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 IL21RQ9HBE5 538 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 FZD3Q9NPG1 666 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 TMEM51Q9NW97 253 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 RCOR3Q9P2K3 495 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 IMPACTQ9P2X3 320 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 SAE1Q9UBE0 346 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 HECAQ9UBI9 543 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 UBA2Q9UBT2 640 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 IL36AQ9UHA7 158 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 EIF2B4Q9UI10 523 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 IPO11Q9UI26 975 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 GMEB2Q9UKD1 530 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 PNMA8BQ9ULN7 279 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 FZD4Q9ULV1 537 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 PACSIN2Q9UNF0 486 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 PCDHGA5Q9Y5G8 931 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 FADS3Q9Y5Q0 445 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 RALGAPA1Q6GYQ0 2036 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 PI4KAP42356 2102 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 ASCC3Q8N3C0 2202 aaKnown RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 AKAP13Q12802 2813 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 MYLKQ15746 1914 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 TCRBV7S2A1N4TA0A589 114 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 LRRD1A4D1F6 860 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 ZNF487B1APH4 448 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 H0Y8X5 98 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 KPNA3O00505 521 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 TRAFD1O14545 582 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 FANCGO15287 622 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 PSTPIP1O43586 416 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 FSBPO95073 299 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 FTCDO95954 541 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 IL2RAP01589 272 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 HLA-DQB2P05538 268 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 MMP2P08253 660 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 ZNF806P0C7X5 589 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 ADRB3P13945 408 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 ITGB7P26010 798 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 CTNNA2P26232 953 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 CTNNA1P35221 906 aaKnown RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 CYLC1P35663 651 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 GARSP41250 739 aaKnown RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 PEX5P50542 639 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 RHOAP61586 193 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 IL10RBQ08334 325 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 NIPAL4Q0D2K0 466 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 KRT81Q14533 505 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 KCTD19Q17RG1 926 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 ZNF284Q2VY69 593 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 TTC31Q49AM3 519 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 INO80DQ53TQ3 878 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 TRIM61Q5EBN2 209 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 LRRC38Q5VT99 294 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 ALG1LQ6GMV1 187 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 RETSATQ6NUM9 610 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 TMCO3Q6UWJ1 677 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 SLC36A4Q6YBV0 504 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 SPOCD1Q6ZMY3 1216 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 GCNT7Q6ZNI0 430 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 MICALCLQ6ZW33 695 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 NT5DC3Q86UY8 548 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 SPATS2Q86XZ4 545 aaKnown RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 SYT12Q8IV01 421 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 CCDC117Q8IWD4 279 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 SLC22A18ASQ8N1D0 253 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 TEX26Q8N6G2 289 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 KDF1Q8NAX2 398 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 TMEM145Q8NBT3 493 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 TMIEQ8NEW7 156 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 CADM4Q8NFZ8 388 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 OR2T34Q8NGX1 318 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 ARRDC2Q8TBH0 407 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 KLK6Q92876 244 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 ECHDC3Q96DC8 303 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 PDLIM2Q96JY6 352 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 PSKH2Q96QS6 385 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 LGMNQ99538 433 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 MYOCQ99972 504 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 MGME1Q9BQP7 344 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 CALN1Q9BXU9 219 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 HDAC8Q9BY41 377 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 BTBD1Q9H0C5 482 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 RETREG1Q9H6L5 497 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 C10orf88Q9H8K7 445 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 SGK2Q9HBY8 427 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 TM9SF3Q9HD45 589 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 VPS45Q9NRW7 570 aa7.29□□□□□ -1.24
TOPBP1-207ENST00000509162 GPR27Q9NS67 375 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms