RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 C1orf74Q96LT6 269 aa11.13□□□□□ -0.63
SH3RF1-203ENST00000508685 IL22Q9GZX6 179 aa11.13□□□□□ -0.63
SH3RF1-203ENST00000508685 NOL6Q9H6R4 1146 aaKnown RBP11.13□□□□□ -0.63
SH3RF1-203ENST00000508685 NMRAL1Q9HBL8 299 aa11.13□□□□□ -0.63
SH3RF1-203ENST00000508685 CPSF2Q9P2I0 782 aaKnown RBP11.13□□□□□ -0.63
SH3RF1-203ENST00000508685 MTRRQ9UBK8 725 aa11.13□□□□□ -0.63
SH3RF1-203ENST00000508685 STK39Q9UEW8 545 aa11.13□□□□□ -0.63
SH3RF1-203ENST00000508685 RAP2CQ9Y3L5 183 aa11.13□□□□□ -0.63
SH3RF1-203ENST00000508685 PSAT1Q9Y617 370 aa11.13□□□□□ -0.63
SH3RF1-203ENST00000508685 SLC12A8A0AV02 714 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 SLC38A8A6NNN8 435 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 MEI4A8MW99 385 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 G3V2L1 256 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 UBTFL6P0CB48 400 aaPredicted RBP11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 SLC2A3P11169 496 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 GLDCP23378 1020 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 CCNCP24863 283 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 HTR7P34969 479 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 EPHB1P54762 984 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 SMARCB1Q12824 385 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 PRKAA1Q13131 559 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 GRM2Q14416 872 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 TRIP4Q15650 581 aaPredicted RBP11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 UGP2Q16851 508 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 PPM1JQ5JR12 505 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 RALGPS1Q5JS13 557 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 SPOUT1Q5T280 376 aaKnown RBP11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 CERCAMQ5T4B2 595 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 ARMC3Q5W041 872 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 FSTL4Q6MZW2 842 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 KIAA1841Q6NSI8 718 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 RNF168Q8IYW5 571 aaPredicted RBP11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 LZTR1Q8N653 840 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 CPSF7Q8N684 471 aaKnown RBP11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 POU5F2Q8N7G0 328 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 TDRD5Q8NAT2 981 aaKnown RBP11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 ICA1LQ8NDH6 482 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 GDPD5Q8WTR4 605 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 NCSTNQ92542 709 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 IGSF8Q969P0 613 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 MYEOVQ96EZ4 313 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 BTN2A3PQ96KV6 586 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 TSGA13Q96PP4 275 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 PPP1R2P1Q96PQ5 205 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 CLSTN3Q9BQT9 956 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 TCF7L2Q9NQB0 619 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 OXSMQ9NWU1 459 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 HACD3Q9P035 362 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 TLK1Q9UKI8 766 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 PSMD13Q9UNM6 376 aa11.12□□□□□ -0.63
SH3RF1-203ENST00000508685 SMIM31A0A1B0GVY4 71 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 HDAC3O15379 428 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 SEC24AO95486 1093 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 F7P08709 466 aaPredicted RBP11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 CLTBP09497 229 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 ZDHHC11BP0C7U3 371 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 CSF2RAP15509 400 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 TPH1P17752 444 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 VCLP18206 1134 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 RPL14P50914 215 aaKnown RBP11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 KCNQ1P51787 676 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 COG7P83436 770 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 NRG1Q02297 640 aaPredicted RBP11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 MPP3Q13368 585 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 LRRC26Q2I0M4 334 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 ANO4Q32M45 955 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 LIN52Q52LA3 116 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 C1orf53Q5VUE5 145 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 AFMIDQ63HM1 303 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 FBXL22Q6P050 247 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 SLC25A41Q8N5S1 370 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 KYQ8NBH2 561 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 C2orf15Q8WU43 125 aaKnown RBP11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 PDCD6IPQ8WUM4 868 aaKnown RBP11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 PYDC1Q8WXC3 89 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 DLG3Q92796 817 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 TOP1MTQ969P6 601 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 FCRL3Q96P31 734 aaPredicted RBP11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 ZYG11BQ9C0D3 744 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 DRC3Q9H069 523 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 EPB41L1Q9H4G0 881 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 MRPL40Q9NQ50 206 aaKnown RBP11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 PRDM5Q9NQX1 630 aaPredicted RBP11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 OLA1Q9NTK5 396 aaKnown RBP11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 TBC1D30Q9Y2I9 924 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 COMMD3-BMI1R4GMX3 469 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 ZCWPW2A0A1B0GU75 182 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 MATN2O00339 956 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 MATN3O15232 486 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 DENRO43583 198 aaKnown RBP11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 DCXO43602 365 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 ATP9BO43861 1147 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 IGLV3-27P01718 113 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 HLA-DQB2P05538 268 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 C2P06681 752 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 PABPC4LP0CB38 370 aaKnown RBP11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 MMEL1Q495T6 779 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 LIPMQ5VYY2 423 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 NAPEPLDQ6IQ20 393 aa11.11□□□□□ -0.63
SH3RF1-203ENST00000508685 ZYG11AQ6WRX3 759 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms