RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 COCHO43405 550 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 BRINP1O60477 761 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 RNF8O76064 485 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 TRUB2O95900 331 aaKnown RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 IGLV3-25P01717 112 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 FYNP06241 537 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 PDGFRAP16234 1089 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 PSMC3P17980 439 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 ABCB4P21439 1286 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 GPD1P21695 349 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 CCR1P32246 355 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 RDXP35241 583 aaKnown RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 THBS2P35442 1172 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 PCK1P35558 622 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 HARS2P49590 506 aaKnown RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 AFF3P51826 1226 aaKnown RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 VAV2P52735 878 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZNF135P52742 658 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 MLLT6P55198 1093 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 EFEMP1Q12805 493 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 KIF5AQ12840 1032 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 PDGFRLQ15198 375 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 GPR19Q15760 415 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 ARL13BQ3SXY8 428 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 ARHGAP29Q52LW3 1261 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 HS1BP3Q53T59 392 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZNF385BQ569K4 471 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 FAM78AQ5JUQ0 283 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 CC2D1AQ6P1N0 951 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 C1orf228Q6PIY5 440 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 CD300LDQ6UXZ3 194 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 RAD9BQ6WBX8 426 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 HTR3DQ70Z44 454 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 BNIPLQ7Z465 357 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 STRA8Q7Z7C7 330 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 PSTKQ8IV42 348 aaKnown RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 MFSD6LQ8IWD5 586 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 CISD2Q8N5K1 135 aaKnown RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 RNF10Q8N5U6 811 aaKnown RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 NIPA2Q8N8Q9 360 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 ARL14EPQ8N8R7 260 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 ATP6V0D2Q8N8Y2 350 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZNF564Q8TBZ8 553 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 BPIFB1Q8TDL5 484 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 DQX1Q8TE96 717 aaKnown RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 CLEC4CQ8WTT0 213 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 RXFP2Q8WXD0 754 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 NDRG1Q92597 394 aaKnown RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 CENPIQ92674 756 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 USP13Q92995 863 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 MYADMQ96S97 322 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 NPY6RQ99463 290 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 CNPY3Q9BT09 278 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 RNF38Q9H0F5 515 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 THAP2Q9H0W7 228 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 TRPC7Q9HCX4 862 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC6A20Q9NP91 592 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 TRPV5Q9NQA5 729 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 SPTLC3Q9NUV7 552 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 OSER1Q9NX31 292 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 STOML2Q9UJZ1 356 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 NAALADL1Q9UQQ1 740 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 APOBEC2Q9Y235 224 aaKnown RBP5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 SH3BP1Q9Y3L3 701 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 CPQQ9Y646 472 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 XIRP2A4UGR9 3374 aa5.67□□□□□ -1.5
HMGB1P44-201ENST00000508597 EYSQ5T1H1 3165 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC12A8A0AV02 714 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 GOLGA6L9A6NEM1 432 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 HEPACAM2A8MVW5 462 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 C2CD4DB7Z1M9 353 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 M0QYT0 321 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 LEFTY2O00292 366 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 KCNK3O14649 394 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZNF263O14978 683 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZSCAN12O43309 604 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 KRT86O43790 486 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 TRIM13O60858 407 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 GRAP2O75791 330 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 IGLV3-27P01718 113 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 APOEP02649 317 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 AMY2AP04746 511 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 CCDC175P0C221 793 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 GLULP15104 373 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 IL9P15248 144 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 GJA1P17302 382 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 AMY2BP19961 511 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 MAN1A1P33908 653 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 HTR7P34969 479 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 RFC1P35251 1148 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 CHKAP35790 457 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC1A1P43005 524 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC11A2P49281 568 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 CXCR3P49682 368 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 SULT1E1P49888 294 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 TBX4P57082 545 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 RNASE9P60153 205 aaKnown RBP5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 CCZ1BP86790 482 aa5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 CCZ1P86791 482 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P44-201ENST00000508597 PFKPQ01813 784 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms