RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 GOLGA6DP0CG33 693 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 RBP3P10745 1247 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 CYP2A6P11509 494 aaPredicted RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 PECAM1P16284 738 aaPredicted RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 CR2P20023 1033 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 AKT2P31751 481 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 GKP32189 559 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 ACTN2P35609 894 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 PTGER3P43115 390 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 AFF3P51826 1226 aaKnown RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 EPHB1P54762 984 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 MAXP61244 160 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 OTUD4Q01804 1114 aaKnown RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 OVGP1Q12889 678 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 SGCGQ13326 291 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 ZNF211Q13398 564 aaPredicted RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 PRPSAP1Q14558 356 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 LLGL1Q15334 1064 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 CSRP2Q16527 193 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 UGP2Q16851 508 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 ZNF569Q5MCW4 686 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 PEAR1Q5VY43 1037 aaPredicted RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 CCDC70Q6NSX1 233 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 DARS2Q6PI48 645 aaKnown RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 NPNTQ6UXI9 565 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 USP45Q70EL2 814 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 PARS2Q7L3T8 475 aaKnown RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 ARMCX6Q7L4S7 300 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 ASCL5Q7RTU5 278 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 ADAT2Q7Z6V5 191 aaKnown RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 HORMAD1Q86X24 394 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 CAMK1DQ8IU85 385 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 SLC41A1Q8IVJ1 513 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 REXO1L1PQ8IX06 675 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 FRMD1Q8N878 549 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 PDCD6IPQ8WUM4 868 aaKnown RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 BIRC7Q96CA5 298 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 ECHDC3Q96DC8 303 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 TRIM44Q96DX7 344 aaPredicted RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 PBKQ96KB5 322 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 SRPK1Q96SB4 655 aaKnown RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 IL12RB2Q99665 862 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 ZDHHC5Q9C0B5 715 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 MIR1-1HGQ9H1L0 117 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 ARRDC1-AS1Q9H2J1 176 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 C6orf106Q9H6K1 298 aaPredicted RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 NOD2Q9HC29 1040 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 CD93Q9NPY3 652 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 TRMT1Q9NXH9 659 aaKnown RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 KCTD5Q9NXV2 234 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 GOLGA6AQ9NYA3 693 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 KLHL8Q9P2G9 620 aaPredicted RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 SAE1Q9UBE0 346 aaPredicted RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 PHTF1Q9UMS5 762 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 ATP8A1Q9Y2Q0 1164 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 FADS3Q9Y5Q0 445 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 OTOGLQ3ZCN5 2332 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 RIF1Q5UIP0 2472 aaKnown RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 NUMA1Q14980 2115 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 GON4LQ3T8J9 2241 aa9.21□□□□□ -0.93
NUP54-207ENST00000508583 PRAMEF26H0Y7S4 382 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 RNF103O00237 685 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 CES2O00748 559 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 TRAFD1O14545 582 aaPredicted RBP9.21□□□□□ -0.94
NUP54-207ENST00000508583 MUSKO15146 869 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 BCAT2O15382 392 aaPredicted RBP9.21□□□□□ -0.94
NUP54-207ENST00000508583 OPHN1O60890 802 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 PGLSO95336 258 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 CPP00450 1065 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 HLA-DQB2P05538 268 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 ZNF806P0C7X5 589 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 SDHBP21912 280 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 ITPKAP23677 461 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 PTPN3P26045 913 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 STIP1P31948 543 aaKnown RBP9.21□□□□□ -0.94
NUP54-207ENST00000508583 RGRP47804 291 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 GRIA4P48058 902 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 ATXN3P54252 364 aaPredicted RBP9.21□□□□□ -0.94
NUP54-207ENST00000508583 RACK1P63244 317 aaKnown RBP9.21□□□□□ -0.94
NUP54-207ENST00000508583 LMNB2Q03252 620 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 ADCY2Q08462 1091 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 KLF1Q13351 362 aaPredicted RBP9.21□□□□□ -0.94
NUP54-207ENST00000508583 P3H1Q32P28 736 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 PLA2G2CQ5R387 149 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 NAPEPLDQ6IQ20 393 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 IL27RAQ6UWB1 636 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 SLC13A5Q86YT5 568 aaPredicted RBP9.21□□□□□ -0.94
NUP54-207ENST00000508583 PGBD5Q8N414 524 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 DEFB119Q8N690 84 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 DENND6BQ8NEG7 585 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 ASB12Q8WXK4 309 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 SERAC1Q96JX3 654 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 TEKT5Q96M29 485 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 AGAP3Q96P47 875 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 TLR10Q9BXR5 811 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 SLC25A51Q9H1U9 297 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 KCND1Q9NSA2 647 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 EIF2B4Q9UI10 523 aaKnown RBP9.21□□□□□ -0.94
NUP54-207ENST00000508583 PCDHB9Q9Y5E1 797 aa9.21□□□□□ -0.94
NUP54-207ENST00000508583 RAI2Q9Y5P3 530 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms