RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ARID3BQ8IVW6 561 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 DDIASQ8IXT1 998 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 RNF10Q8N5U6 811 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 MYRIPQ8NFW9 859 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CEP70Q8NHQ1 597 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SEC16BQ96JE7 1060 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SERPINI1Q99574 410 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ARPC5LQ9BPX5 153 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ULBP1Q9BZM6 244 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF518BQ9C0D4 1074 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 DPEP3Q9H4B8 488 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CISHQ9NSE2 258 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 INTS10Q9NVR2 710 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 GRID1Q9ULK0 1009 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 DYRK1BQ9Y463 629 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ASCC3Q8N3C0 2202 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TRBV23OR9-2A0A075B6M9 112 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 LOC100653049A0A140TA62 436 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 GCATO75600 419 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 KRT34O76011 436 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CNTN5O94779 1100 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 OR6A2O95222 327 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 VIPP01282 170 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SERPING1P05155 500 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 FGRP09769 529 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RRM1P23921 792 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CASP1P29466 404 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TSPAN7P41732 249 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 EPHB4P54760 987 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MRPS21P82921 87 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TMPRSS15P98073 1019 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ELP6Q0PNE2 266 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ANKRD20A4Q4UJ75 823 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ANKRD20A2Q5SQ80 823 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ANKRD20A1Q5TYW2 823 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 KIAA0895LQ68EN5 471 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF720Q7Z2F6 126 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TTC7BQ86TV6 843 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PACS2Q86VP3 889 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 COMMD2Q86X83 199 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CBWD2Q8IUF1 395 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TRAPPC5Q8IUR0 188 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 STK40Q8N2I9 435 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 KIAA1958Q8N8K9 716 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 LPCAT1Q8NF37 534 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SLC30A5Q8TAD4 765 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SNX21Q969T3 373 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MED8Q96G25 268 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TOE1Q96GM8 510 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PCED1BQ96HM7 432 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ART5Q96L15 291 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 C11orf70Q9BRQ4 267 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 DUSP16Q9BY84 665 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ZYG11BQ9C0D3 744 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TWSG1Q9GZX9 223 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RC3H2Q9HBD1 1191 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 POPDC2Q9HBU9 364 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ARNT2Q9HBZ2 717 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 FBRSL1Q9HCM7 1045 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SPHK2Q9NRA0 654 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CRYL1Q9Y2S2 319 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 NOSIPQ9Y314 301 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CACNA1BQ00975 2339 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 A0A0B4J269 797 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TRIM49BA6NDI0 452 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SYCE1LA8MT33 242 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 RNGTTO60942 597 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 IFNA16P05015 189 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TYRP1P17643 537 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 GLRBP48167 497 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 FMO5P49326 533 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 DRAP1Q14919 205 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 C15orf59Q2T9L4 293 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 C6orf10Q5SRN2 563 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 C10orf62Q5T681 223 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ARMC12Q5T9G4 340 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ACAD11Q709F0 780 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SLC9B2Q86UD5 537 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 HEATR4Q86WZ0 1026 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TREML1Q86YW5 311 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SIAH1Q8IUQ4 282 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CDKL3Q8IVW4 592 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SCAIQ8N9R8 606 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 SHC3Q92529 594 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 NUS1Q96E22 293 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TSPAN17Q96FV3 270 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 GFM1Q96RP9 751 aaKnown RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CBWD1Q9BRT8 395 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 GPR62Q9BZJ7 368 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 TTYH1Q9H313 450 aaPredicted RBP2.98□□□□□ -1.93
NEDD4-208ENST00000508342 LDAHQ9H6V9 325 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CAAP1Q9H8G2 361 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF556Q9HAH1 456 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 NEK6Q9HC98 313 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF304Q9HCX3 659 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 INTS13Q9NVM9 706 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 CD274Q9NZQ7 290 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 MBD2Q9UBB5 411 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 APEX2Q9UBZ4 518 aa2.98□□□□□ -1.93
NEDD4-208ENST00000508342 PLXNA4Q9HCM2 1894 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms