RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 CCDC13Q8IYE1 715 aa28.23■■■□□ 2.11
MSX2-202ENST00000507785 RBM41Q96IZ5 413 aaKnown RBP28.23■■■□□ 2.11
MSX2-202ENST00000507785 FEM1CQ96JP0 617 aa28.23■■■□□ 2.11
MSX2-202ENST00000507785 LGMNQ99538 433 aa28.23■■■□□ 2.11
MSX2-202ENST00000507785 NOD2Q9HC29 1040 aa28.23■■■□□ 2.11
MSX2-202ENST00000507785 ANKRD6Q9Y2G4 727 aa28.23■■■□□ 2.11
MSX2-202ENST00000507785 PRLRP16471 622 aa28.22■■■□□ 2.11
MSX2-202ENST00000507785 CD38P28907 300 aa28.22■■■□□ 2.11
MSX2-202ENST00000507785 PEX5P50542 639 aa28.22■■■□□ 2.11
MSX2-202ENST00000507785 ATXN3P54252 364 aaPredicted RBP28.22■■■□□ 2.11
MSX2-202ENST00000507785 DYNLT1P63172 113 aa28.22■■■□□ 2.11
MSX2-202ENST00000507785 UGP2Q16851 508 aa28.22■■■□□ 2.11
MSX2-202ENST00000507785 RALGPS1Q5JS13 557 aa28.22■■■□□ 2.11
MSX2-202ENST00000507785 NT5DC3Q86UY8 548 aa28.22■■■□□ 2.11
MSX2-202ENST00000507785 ZSCAN30Q86W11 494 aa28.22■■■□□ 2.11
MSX2-202ENST00000507785 TMEM145Q8NBT3 493 aa28.22■■■□□ 2.11
MSX2-202ENST00000507785 NT5MQ9NPB1 228 aa28.22■■■□□ 2.11
MSX2-202ENST00000507785 SCUBE2Q9NQ36 999 aa28.22■■■□□ 2.11
MSX2-202ENST00000507785 AASDHPPTQ9NRN7 309 aa28.22■■■□□ 2.11
MSX2-202ENST00000507785 DNAAF2Q9NVR5 837 aaKnown RBP28.22■■■□□ 2.11
MSX2-202ENST00000507785 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP28.21■■■□□ 2.11
MSX2-202ENST00000507785 UPK3BL1B0FP48 263 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 UPK3BL2E5RIL1 263 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 PRAMEF26H0Y7S4 382 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 SLC31A1O15431 190 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 HTRA2O43464 458 aaPredicted RBP28.21■■■□□ 2.11
MSX2-202ENST00000507785 CST8O60676 142 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 CCNB1P14635 433 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 CCZ1BP86790 482 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 CCZ1P86791 482 aaPredicted RBP28.21■■■□□ 2.11
MSX2-202ENST00000507785 LLGL1Q15334 1064 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 PPP2R5EQ16537 467 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 ALG1LQ6GMV1 187 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 CCNYQ8ND76 341 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 SPOCK2Q92563 424 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 RBM22Q9NW64 420 aaKnown RBP eCLIP28.21■■■□□ 2.11
MSX2-202ENST00000507785 AMACRQ9UHK6 382 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 SNX11Q9Y5W9 270 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 PCNX2A6NKB5 2137 aa28.21■■■□□ 2.11
MSX2-202ENST00000507785 CCDC66A2RUB6 948 aa28.2■■■□□ 2.1
MSX2-202ENST00000507785 NEMP1O14524 444 aa28.2■■■□□ 2.1
MSX2-202ENST00000507785 CTSKP43235 329 aa28.2■■■□□ 2.1
MSX2-202ENST00000507785 PDK1Q15118 436 aa28.2■■■□□ 2.1
MSX2-202ENST00000507785 KAZNQ674X7 775 aa28.2■■■□□ 2.1
MSX2-202ENST00000507785 IL27RAQ6UWB1 636 aa28.2■■■□□ 2.1
MSX2-202ENST00000507785 ADAT2Q7Z6V5 191 aaKnown RBP28.2■■■□□ 2.1
MSX2-202ENST00000507785 C1QTNF2Q9BXJ5 285 aa28.2■■■□□ 2.1
MSX2-202ENST00000507785 SLC17A9Q9BYT1 436 aa28.2■■■□□ 2.1
MSX2-202ENST00000507785 PCDH12Q9NPG4 1184 aa28.2■■■□□ 2.1
MSX2-202ENST00000507785 CAPN6Q9Y6Q1 641 aa28.2■■■□□ 2.1
MSX2-202ENST00000507785 IGLON5A6NGN9 336 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 SOCS5O75159 536 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 PECAM1P16284 738 aaPredicted RBP28.19■■■□□ 2.1
MSX2-202ENST00000507785 HNRNPA2B1P22626 353 aaKnown RBP28.19■■■□□ 2.1
MSX2-202ENST00000507785 NR2C2P49116 596 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 COPS2P61201 443 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 IFI35P80217 286 aaPredicted RBP28.19■■■□□ 2.1
MSX2-202ENST00000507785 HLA-BQ31612 363 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 TMEM52BQ4KMG9 183 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 CFAP58Q5T655 872 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 CCDC50Q8IVM0 306 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 RNF10Q8N5U6 811 aaKnown RBP28.19■■■□□ 2.1
MSX2-202ENST00000507785 MFSD2AQ8NA29 543 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 ASB12Q8WXK4 309 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 ALG3Q92685 438 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 IL12RB2Q99665 862 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 SEMA3CQ99985 751 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 POLR1EQ9GZS1 481 aaKnown RBP28.19■■■□□ 2.1
MSX2-202ENST00000507785 IL21RQ9HBE5 538 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 FZD3Q9NPG1 666 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 SAE1Q9UBE0 346 aaPredicted RBP28.19■■■□□ 2.1
MSX2-202ENST00000507785 CA5BQ9Y2D0 317 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 ATP8A1Q9Y2Q0 1164 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 PCDHGC4Q9Y5F7 938 aa28.19■■■□□ 2.1
MSX2-202ENST00000507785 KCNK1O00180 336 aa28.18■■■□□ 2.1
MSX2-202ENST00000507785 RIOK3O14730 519 aaKnown RBP28.18■■■□□ 2.1
MSX2-202ENST00000507785 PPP1R12AO14974 1030 aaPredicted RBP28.18■■■□□ 2.1
MSX2-202ENST00000507785 HLA-DQB2P05538 268 aa28.18■■■□□ 2.1
MSX2-202ENST00000507785 TGM2P21980 687 aa28.18■■■□□ 2.1
MSX2-202ENST00000507785 XPAP23025 273 aaPredicted RBP28.18■■■□□ 2.1
MSX2-202ENST00000507785 ELP6Q0PNE2 266 aa28.18■■■□□ 2.1
MSX2-202ENST00000507785 TRAF2Q12933 501 aa28.18■■■□□ 2.1
MSX2-202ENST00000507785 IHHQ14623 411 aa28.18■■■□□ 2.1
MSX2-202ENST00000507785 UAP1L1Q3KQV9 507 aa28.18■■■□□ 2.1
MSX2-202ENST00000507785 IQCHQ86VS3 1027 aa28.18■■■□□ 2.1
MSX2-202ENST00000507785 SYCE1Q8N0S2 351 aa28.18■■■□□ 2.1
MSX2-202ENST00000507785 HERPUD2Q9BSE4 406 aa28.18■■■□□ 2.1
MSX2-202ENST00000507785 BRD8Q9H0E9 1235 aa28.18■■■□□ 2.1
MSX2-202ENST00000507785 GAREM1Q9H706 876 aa28.18■■■□□ 2.1
MSX2-202ENST00000507785 DCDC2BA2VCK2 349 aa28.17■■■□□ 2.1
MSX2-202ENST00000507785 RAD51BO15315 384 aa28.17■■■□□ 2.1
MSX2-202ENST00000507785 OPHN1O60890 802 aa28.17■■■□□ 2.1
MSX2-202ENST00000507785 CER1O95813 267 aa28.17■■■□□ 2.1
MSX2-202ENST00000507785 PAK4O96013 591 aaPredicted RBP28.17■■■□□ 2.1
MSX2-202ENST00000507785 AKT2P31751 481 aa28.17■■■□□ 2.1
MSX2-202ENST00000507785 PTPN7P35236 360 aa28.17■■■□□ 2.1
MSX2-202ENST00000507785 MMP12P39900 470 aa28.17■■■□□ 2.1
MSX2-202ENST00000507785 RWDD2BP57060 319 aa28.17■■■□□ 2.1
MSX2-202ENST00000507785 C21orf59P57076 290 aa28.17■■■□□ 2.1
MSX2-202ENST00000507785 ZBTB17Q13105 803 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms