RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 HMGN5P82970 282 aaKnown RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 MC2RQ01718 297 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 DPYDQ12882 1025 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 PLEKHN1Q494U1 663 aaPredicted RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 SLC6A19Q695T7 634 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 CXorf57Q6NSI4 855 aaKnown RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 CDH24Q86UP0 819 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 OR4D9Q8NGE8 314 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 OR52K2Q8NGK3 314 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 ASB12Q8WXK4 309 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 ALG14Q96F25 216 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 LLPHQ9BRT6 129 aaKnown RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 ZPBPQ9BS86 351 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 C1QTNF7Q9BXJ2 289 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 IMPG2Q9BZV3 1241 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 ZSCAN16Q9H4T2 348 aaPredicted RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 APOBEC3GQ9HC16 384 aaKnown RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 MOSPD1Q9UJG1 213 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 TLR6Q9Y2C9 796 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 TMEM184BQ9Y519 407 aaPredicted RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 ARHGEF17Q96PE2 2063 aaPredicted RBP7.3□□□□□ -1.24
VCAN-207ENST00000507162 ABCA4P78363 2273 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 PCSK5Q92824 1860 aa7.3□□□□□ -1.24
VCAN-207ENST00000507162 PRRC2AP48634 2157 aaKnown RBP7.29□□□□□ -1.24
VCAN-207ENST00000507162 FRMD3A2A2Y4 597 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 ARGFXA6NJG6 315 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 A6NL46 340 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 F5H423 210 aaPredicted RBP7.29□□□□□ -1.24
VCAN-207ENST00000507162 TOR1BO14657 336 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 CREG1O75629 220 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 TM7SF2O76062 418 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 APOEP02649 317 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 LTFP02788 710 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 THRAP10827 490 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 CD1EP15812 388 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 BPIP17213 487 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 NFKBIAP25963 317 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 ABL2P42684 1182 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 PEX5P50542 639 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 KLHL40Q2TBA0 621 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 ZACNQ401N2 412 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 VWA2Q5GFL6 755 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 RABGAP1LQ5R372 815 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 CPZQ66K79 652 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 KCTD16Q68DU8 428 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 C6orf15Q6UXA7 325 aaPredicted RBP7.29□□□□□ -1.24
VCAN-207ENST00000507162 PARS2Q7L3T8 475 aaKnown RBP7.29□□□□□ -1.24
VCAN-207ENST00000507162 TAOK1Q7L7X3 1001 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 SLC47A2Q86VL8 602 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 ZSCAN30Q86W11 494 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 ZGRF1Q86YA3 2104 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 IRF2BP1Q8IU81 584 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 RHOT1Q8IXI2 618 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 IQCKQ8N0W5 287 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 RYBPQ8N488 228 aaPredicted RBP7.29□□□□□ -1.24
VCAN-207ENST00000507162 RBMXL3Q8N7X1 1067 aaKnown RBP7.29□□□□□ -1.24
VCAN-207ENST00000507162 BMPERQ8N8U9 685 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 SLC4A11Q8NBS3 891 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 GALNT6Q8NCL4 622 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 ATL2Q8NHH9 583 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 CCL4L1Q8NHW4 92 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 ZNF507Q8TCN5 953 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 DQX1Q8TE96 717 aaKnown RBP7.29□□□□□ -1.24
VCAN-207ENST00000507162 PNPLA2Q96AD5 504 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 AHCYL2Q96HN2 611 aaKnown RBP7.29□□□□□ -1.24
VCAN-207ENST00000507162 SERPINB11Q96P15 392 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 RPRD1AQ96P16 312 aaPredicted RBP7.29□□□□□ -1.24
VCAN-207ENST00000507162 RBM15Q96T37 977 aaKnown RBP eCLIP7.29□□□□□ -1.24
VCAN-207ENST00000507162 MDFIQ99750 246 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 HEPHQ9BQS7 1158 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 APOOQ9BUR5 198 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 TMEM168Q9H0V1 697 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 ING2Q9H160 280 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 SUDS3Q9H7L9 328 aaPredicted RBP7.29□□□□□ -1.24
VCAN-207ENST00000507162 CNGB3Q9NQW8 809 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 HESX1Q9UBX0 185 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 SLC12A6Q9UHW9 1150 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 OR1A2Q9Y585 309 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 COPG1Q9Y678 874 aaKnown RBP7.29□□□□□ -1.24
VCAN-207ENST00000507162 WASF2Q9Y6W5 498 aa7.29□□□□□ -1.24
VCAN-207ENST00000507162 TCAF2A6NFQ2 919 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 C16orf96A6NNT2 1141 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 POLR1CO15160 346 aaPredicted RBP7.28□□□□□ -1.24
VCAN-207ENST00000507162 ECEL1O95672 775 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 DLGAP3O95886 979 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 ITIH2P19823 946 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 GKP32189 559 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 GLRBP48167 497 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 RAD23BP54727 409 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 FOXM1Q08050 763 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 BST2Q10589 180 aaKnown RBP7.28□□□□□ -1.24
VCAN-207ENST00000507162 INPP5AQ14642 412 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 NFATC4Q14934 902 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 LRRC14Q15048 493 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 IRF4Q15306 451 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 CHRNA6Q15825 494 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 CLPPQ16740 277 aaPredicted RBP7.28□□□□□ -1.24
VCAN-207ENST00000507162 LRRC73Q5JTD7 316 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 ARHGAP17Q68EM7 881 aa7.28□□□□□ -1.24
VCAN-207ENST00000507162 ANKRD40Q6AI12 368 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms