RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 APOC4-APOC2K7ER74 178 aa20.06■□□□□ 0.8
SNX25-204ENST00000506896 TSPAN6O43657 245 aa20.06■□□□□ 0.8
SNX25-204ENST00000506896 APOC2P02655 101 aa20.06■□□□□ 0.8
SNX25-204ENST00000506896 IFI35P80217 286 aaPredicted RBP20.06■□□□□ 0.8
SNX25-204ENST00000506896 AP1B1Q10567 949 aa20.06■□□□□ 0.8
SNX25-204ENST00000506896 ALG1LQ6GMV1 187 aa20.06■□□□□ 0.8
SNX25-204ENST00000506896 KIAA1161Q6NSJ0 714 aa20.06■□□□□ 0.8
SNX25-204ENST00000506896 NPNTQ6UXI9 565 aa20.06■□□□□ 0.8
SNX25-204ENST00000506896 PRPF39Q86UA1 669 aaKnown RBP20.06■□□□□ 0.8
SNX25-204ENST00000506896 CAMK1DQ8IU85 385 aa20.06■□□□□ 0.8
SNX25-204ENST00000506896 NT5MQ9NPB1 228 aa20.06■□□□□ 0.8
SNX25-204ENST00000506896 RBM22Q9NW64 420 aaKnown RBP eCLIP20.06■□□□□ 0.8
SNX25-204ENST00000506896 DMTF1Q9Y222 760 aa20.06■□□□□ 0.8
SNX25-204ENST00000506896 DDX3YO15523 660 aaKnown RBP20.05■□□□□ 0.8
SNX25-204ENST00000506896 RNGTTO60942 597 aaKnown RBP20.05■□□□□ 0.8
SNX25-204ENST00000506896 SOCS5O75159 536 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 TJP3O95049 919 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 PCDH8O95206 1070 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 PYGMP11217 842 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 XPAP23025 273 aaPredicted RBP20.05■□□□□ 0.8
SNX25-204ENST00000506896 AFF3P51826 1226 aaKnown RBP20.05■□□□□ 0.8
SNX25-204ENST00000506896 PPP2CBP62714 309 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 POLR2LP62875 67 aaKnown RBP20.05■□□□□ 0.8
SNX25-204ENST00000506896 PPP2CAP67775 309 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 ADCY2Q08462 1091 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 ITKQ08881 620 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 LLGL1Q15334 1064 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 SETMARQ53H47 684 aaPredicted RBP20.05■□□□□ 0.8
SNX25-204ENST00000506896 CCDC181Q5TID7 509 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 HORMAD1Q86X24 394 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 ZCCHC9Q8N567 271 aaKnown RBP20.05■□□□□ 0.8
SNX25-204ENST00000506896 TRIM58Q8NG06 486 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 TFB1MQ8WVM0 346 aaKnown RBP20.05■□□□□ 0.8
SNX25-204ENST00000506896 SPOCK2Q92563 424 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 ECHDC3Q96DC8 303 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 FEM1CQ96JP0 617 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 IL12RB2Q99665 862 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 ORAI3Q9BRQ5 295 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 HEMGNQ9BXL5 484 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 NOD2Q9HC29 1040 aa20.05■□□□□ 0.8
SNX25-204ENST00000506896 PACSIN2Q9UNF0 486 aaPredicted RBP20.05■□□□□ 0.8
SNX25-204ENST00000506896 A0A1W2PQU0 124 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 HACD1B0YJ81 288 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 NEMP1O14524 444 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 AREL1O15033 823 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 MTSS1O43312 755 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 KCNK5O95279 499 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 SYPP08247 313 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 PECAM1P16284 738 aaPredicted RBP20.04■□□□□ 0.8
SNX25-204ENST00000506896 ABL2P42684 1182 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 MAXP61244 160 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 RPS21P63220 83 aaKnown RBP20.04■□□□□ 0.8
SNX25-204ENST00000506896 RACK1P63244 317 aaKnown RBP20.04■□□□□ 0.8
SNX25-204ENST00000506896 ELP6Q0PNE2 266 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 XRCC4Q13426 336 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 PRKD1Q15139 912 aaPredicted RBP20.04■□□□□ 0.8
SNX25-204ENST00000506896 TEAD4Q15561 434 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 UGP2Q16851 508 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 PAF1Q8N7H5 531 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 SEMA3CQ99985 751 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 SAE1Q9UBE0 346 aaPredicted RBP20.04■□□□□ 0.8
SNX25-204ENST00000506896 ATP8A1Q9Y2Q0 1164 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 SLCO1B1Q9Y6L6 691 aa20.04■□□□□ 0.8
SNX25-204ENST00000506896 DOCK9Q9BZ29 2069 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 UPK3BL1B0FP48 263 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 UPK3BL2E5RIL1 263 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 KCNK1O00180 336 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 TRAFD1O14545 582 aaPredicted RBP20.03■□□□□ 0.8
SNX25-204ENST00000506896 ZSCAN12O43309 604 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 HTRA2O43464 458 aaPredicted RBP20.03■□□□□ 0.8
SNX25-204ENST00000506896 GJB3O75712 270 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 JCHAINP01591 159 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 ADRB1P08588 477 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 TIMP2P16035 220 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 NFKBIAP25963 317 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 GRIA4P48058 902 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 ERAP2Q6P179 960 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 LRRN4Q8WUT4 740 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 SKA1Q96BD8 255 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 ZDHHC5Q9C0B5 715 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 KCNF1Q9H3M0 494 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 TM9SF3Q9HD45 589 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 DNAAF2Q9NVR5 837 aaKnown RBP20.03■□□□□ 0.8
SNX25-204ENST00000506896 TTLL3Q9Y4R7 772 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 CABIN1Q9Y6J0 2220 aa20.03■□□□□ 0.8
SNX25-204ENST00000506896 GOLGA6L9A6NEM1 432 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 ZNF189O75820 626 aaPredicted RBP20.02■□□□□ 0.8
SNX25-204ENST00000506896 HLA-DQB2P05538 268 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 CSRP1P21291 193 aaKnown RBP20.02■□□□□ 0.8
SNX25-204ENST00000506896 CA4P22748 312 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 MAT2AP31153 395 aaKnown RBP20.02■□□□□ 0.8
SNX25-204ENST00000506896 BNC1Q01954 994 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 ZNF284Q2VY69 593 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 UAP1L1Q3KQV9 507 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 TMEM259Q4ZIN3 620 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 SLC45A4Q5BKX6 768 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 MEI1Q5TIA1 1274 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 NAPEPLDQ6IQ20 393 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 MINDY1Q8N5J2 469 aa20.02■□□□□ 0.8
SNX25-204ENST00000506896 SERAC1Q96JX3 654 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms