RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 NCKIPSDQ9NZQ3 722 aa16.44■□□□□ 0.22
SNX2-205ENST00000506874 ADAM22Q9P0K1 906 aa16.44■□□□□ 0.22
SNX2-205ENST00000506874 SALL4Q9UJQ4 1053 aa16.44■□□□□ 0.22
SNX2-205ENST00000506874 PNMA8BQ9ULN7 279 aaPredicted RBP16.44■□□□□ 0.22
SNX2-205ENST00000506874 CAPN11Q9UMQ6 739 aa16.44■□□□□ 0.22
SNX2-205ENST00000506874 NEU3Q9UQ49 428 aa16.44■□□□□ 0.22
SNX2-205ENST00000506874 CXorf51AA0A1B0GTR3 108 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 EME2A4GXA9 379 aaPredicted RBP16.43■□□□□ 0.22
SNX2-205ENST00000506874 AREL1O15033 823 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 CASC3O15234 703 aaKnown RBP16.43■□□□□ 0.22
SNX2-205ENST00000506874 KLK10O43240 276 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 TM7SF2O76062 418 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 DXOO77932 396 aaKnown RBP16.43■□□□□ 0.22
SNX2-205ENST00000506874 GYPCP04921 128 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 ANXA6P08133 673 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 KRT3P12035 628 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 SKILP12757 684 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 RBMS1P29558 406 aaKnown RBP16.43■□□□□ 0.22
SNX2-205ENST00000506874 RFC1P35251 1148 aaPredicted RBP16.43■□□□□ 0.22
SNX2-205ENST00000506874 ERVPABLB-1P60509 514 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 ZBED6P86452 979 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 RAD51Q06609 339 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 ACAD10Q6JQN1 1059 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 RBM44Q6ZP01 1051 aaKnown RBP16.43■□□□□ 0.22
SNX2-205ENST00000506874 LSM14AQ8ND56 463 aaKnown RBP16.43■□□□□ 0.22
SNX2-205ENST00000506874 CENPIQ92674 756 aaPredicted RBP16.43■□□□□ 0.22
SNX2-205ENST00000506874 GDAP1L1Q96MZ0 367 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.43■□□□□ 0.22
SNX2-205ENST00000506874 SELENOOQ9BVL4 669 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 SLC13A1Q9BZW2 595 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 KLC2Q9H0B6 622 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 RETREG1Q9H6L5 497 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 MBNL1Q9NR56 388 aaKnown RBP16.43■□□□□ 0.22
SNX2-205ENST00000506874 THSD1Q9NS62 852 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 COL27A1Q8IZC6 1860 aaPredicted RBP16.43■□□□□ 0.22
SNX2-205ENST00000506874 LRRK1Q38SD2 2015 aa16.43■□□□□ 0.22
SNX2-205ENST00000506874 A0A1W2PNU3 283 aaPredicted RBP16.42■□□□□ 0.22
SNX2-205ENST00000506874 PMS2P1A4D2B8 440 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 ZSCAN5CA6NGD5 496 aaPredicted RBP16.42■□□□□ 0.22
SNX2-205ENST00000506874 TPP1O14773 563 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 INSIG1O15503 277 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 IGSF6O95976 241 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 CALB1P05937 261 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 TIMP2P16035 220 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 GPD1P21695 349 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 XPAP23025 273 aaPredicted RBP16.42■□□□□ 0.22
SNX2-205ENST00000506874 EPHB2P29323 1055 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 EIF4A3P38919 411 aaKnown RBP16.42■□□□□ 0.22
SNX2-205ENST00000506874 TMPRSS3P57727 454 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 RHOAP61586 193 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 SCYL2Q6P3W7 929 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 WDR59Q6PJI9 974 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 PCSK4Q6UW60 755 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 MON1BQ7L1V2 547 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 SLFN11Q7Z7L1 901 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 SLC35F3Q8IY50 421 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 ZNF843Q8N446 348 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 TPCN2Q8NHX9 752 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 SYN2Q92777 582 aaPredicted RBP16.42■□□□□ 0.22
SNX2-205ENST00000506874 GLMNQ92990 594 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 HMCESQ96FZ2 354 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 EXOC2Q96KP1 924 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 EPAS1Q99814 870 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 LRRC61Q9BV99 259 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 BOCQ9BWV1 1114 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 C1QTNF7Q9BXJ2 289 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 NOL6Q9H6R4 1146 aaKnown RBP16.42■□□□□ 0.22
SNX2-205ENST00000506874 TAS2R14Q9NYV8 317 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 COQ6Q9Y2Z9 468 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 LUC7L2Q9Y383 392 aaKnown RBP16.42■□□□□ 0.22
SNX2-205ENST00000506874 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.42■□□□□ 0.22
SNX2-205ENST00000506874 ENTPD2Q9Y5L3 495 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 ZNF462Q96JM2 2506 aa16.42■□□□□ 0.22
SNX2-205ENST00000506874 TMCO5BA8MYB1 307 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 LMO7DNF2Z398 122 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 DDX3XO00571 662 aaKnown RBP eCLIP16.41■□□□□ 0.221e-7■□□□□ 11
SNX2-205ENST00000506874 YY2O15391 372 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 CREB3O43889 395 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 CELA2BP08218 269 aaPredicted RBP16.41■□□□□ 0.22
SNX2-205ENST00000506874 TSHRP16473 764 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 CASP14P31944 242 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 RPIAP49247 311 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 GSCP56915 257 aaPredicted RBP16.41■□□□□ 0.22
SNX2-205ENST00000506874 PPARDQ03181 441 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 C1QBPQ07021 282 aaKnown RBP16.41■□□□□ 0.22
SNX2-205ENST00000506874 IRF4Q15306 451 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 HGSNATQ68CP4 663 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 SPECC1LQ69YQ0 1117 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 ZNF605Q86T29 641 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 RTL3Q8N8U3 475 aaKnown RBP16.41■□□□□ 0.22
SNX2-205ENST00000506874 TP53I13Q8NBR0 393 aaPredicted RBP16.41■□□□□ 0.22
SNX2-205ENST00000506874 NTAN1Q96AB6 310 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 NCAPGQ9BPX3 1015 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 CLPBQ9H078 707 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 RBSNQ9H1K0 784 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 WDR70Q9NW82 654 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 SIRPGQ9P1W8 387 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 GULP1Q9UBP9 304 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 DOLKQ9UPQ8 538 aa16.41■□□□□ 0.22
SNX2-205ENST00000506874 CFAP46Q8IYW2 2715 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms