RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CCDC175P0C221 793 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 TGM2P21980 687 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 PTPN7P35236 360 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 MAPK8P45983 427 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 GRIA4P48058 902 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 RWDD2BP57060 319 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 RACK1P63244 317 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 IFI35P80217 286 aaPredicted RBP18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 BCL2L1Q07817 233 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 FGL2Q14314 439 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 PDK1Q15118 436 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 STPG1Q5TH74 334 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 BBS12Q6ZW61 710 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 ERMP1Q7Z2K6 904 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 TTC7BQ86TV6 843 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 PRPF39Q86UA1 669 aaKnown RBP18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 SYCE1Q8N0S2 351 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 HCAR2Q8TDS4 363 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 HAUS1Q96CS2 278 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 SERAC1Q96JX3 654 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 IL12RB2Q99665 862 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 SCUBE2Q9NQ36 999 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 RBM22Q9NW64 420 aaKnown RBP eCLIP18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 CA5BQ9Y2D0 317 aa18.41■□□□□ 0.54
PDLIM7-216ENST00000506537 TRPM6Q9BX84 2022 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 A0A1W2PR77 199 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 SLC31A1O15431 190 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 HTRA2O43464 458 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 TSPAN6O43657 245 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 PYGMP11217 842 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 NR2C2P49116 596 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 LIMK1P53667 647 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 COPS2P61201 443 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 DSC2Q02487 901 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 AP1B1Q10567 949 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 TRAF2Q12933 501 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 PRKD1Q15139 912 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 UGP2Q16851 508 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 SETMARQ53H47 684 aaPredicted RBP18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 NAPEPLDQ6IQ20 393 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 KIAA1161Q6NSJ0 714 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 BRAT1Q6PJG6 821 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 ZNF662Q6ZS27 426 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 CNTD1Q8N815 330 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 PDLIM2Q96JY6 352 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 MYOCQ99972 504 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 SEMA3CQ99985 751 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 GTPBP2Q9BX10 602 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 CEP41Q9BYV8 373 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 POLR1EQ9GZS1 481 aaKnown RBP18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 KCNF1Q9H3M0 494 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 FZD3Q9NPG1 666 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 PCDH12Q9NPG4 1184 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 TMEM9BQ9NQ34 198 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 DMTF1Q9Y222 760 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 ATP8A1Q9Y2Q0 1164 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 PCDHGC4Q9Y5F7 938 aa18.4■□□□□ 0.54
PDLIM7-216ENST00000506537 C4orf47A7E2U8 309 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 MIF4GDA9UHW6 222 aaKnown RBP18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 PPP1R12AO14974 1030 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 SOCS5O75159 536 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 JCHAINP01591 159 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 NUDT1P36639 197 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 MMP12P39900 470 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 RPS21P63220 83 aaKnown RBP18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 SEMG2Q02383 582 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 NIPAL4Q0D2K0 466 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 ZNF211Q13398 564 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 KIF19Q2TAC6 998 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 RALGPS1Q5JS13 557 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 CFAP58Q5T655 872 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 MINDY1Q8N5J2 469 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 TMEM145Q8NBT3 493 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 ARRDC2Q8TBH0 407 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 SPOCK2Q92563 424 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 HES6Q96HZ4 224 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 FEM1CQ96JP0 617 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 OSBPL8Q9BZF1 889 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 LZTFL1Q9NQ48 299 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 AASDHPPTQ9NRN7 309 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 DLL3Q9NYJ7 618 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 AMACRQ9UHK6 382 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 CDV3Q9UKY7 258 aaKnown RBP18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 PPP2R2CQ9Y2T4 447 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 TTLL3Q9Y4R7 772 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 TMEM131Q92545 1883 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 LRRK1Q38SD2 2015 aa18.39■□□□□ 0.53
PDLIM7-216ENST00000506537 IGLON5A6NGN9 336 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 NEMP1O14524 444 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 RIOK3O14730 519 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 SLC30A4O14863 429 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 SYPP08247 313 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 CD38P28907 300 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 SUOXP51687 545 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 ITKQ08881 620 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 TEAD4Q15561 434 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 TMEM52BQ4KMG9 183 aa18.38■□□□□ 0.53
PDLIM7-216ENST00000506537 P3H4Q92791 437 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms