RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 MAK16Q9BXY0 300 aaKnown RBP18■□□□□ 0.47
SMN1-204ENST00000506163 SLC17A9Q9BYT1 436 aa18■□□□□ 0.47
SMN1-204ENST00000506163 ZDHHC5Q9C0B5 715 aa18■□□□□ 0.47
SMN1-204ENST00000506163 GAREM1Q9H706 876 aa18■□□□□ 0.47
SMN1-204ENST00000506163 ATP13A3Q9H7F0 1226 aa18■□□□□ 0.47
SMN1-204ENST00000506163 PCDH12Q9NPG4 1184 aa18■□□□□ 0.47
SMN1-204ENST00000506163 DMTF1Q9Y222 760 aa18■□□□□ 0.47
SMN1-204ENST00000506163 PCDHGC4Q9Y5F7 938 aa18■□□□□ 0.47
SMN1-204ENST00000506163 MMP20O60882 483 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 ZRANB2O95218 330 aaKnown RBP eCLIP17.99■□□□□ 0.47
SMN1-204ENST00000506163 CD59P13987 128 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 CCNB1P14635 433 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 MX2P20592 715 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 CTNNA1P35221 906 aaKnown RBP17.99■□□□□ 0.47
SMN1-204ENST00000506163 HSPA9P38646 679 aaKnown RBP17.99■□□□□ 0.47
SMN1-204ENST00000506163 ATXN3P54252 364 aaPredicted RBP17.99■□□□□ 0.47
SMN1-204ENST00000506163 CLDN2P57739 230 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 AP1S1P61966 158 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 RPS21P63220 83 aaKnown RBP17.99■□□□□ 0.47
SMN1-204ENST00000506163 PPIDQ08752 370 aaKnown RBP17.99■□□□□ 0.47
SMN1-204ENST00000506163 TEAD4Q15561 434 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 KAZNQ674X7 775 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 KIAA1161Q6NSJ0 714 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 NT5DC3Q86UY8 548 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 SPATS2Q86XZ4 545 aaKnown RBP17.99■□□□□ 0.47
SMN1-204ENST00000506163 LRRC8AQ8IWT6 810 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 RCOR2Q8IZ40 523 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 CNTD1Q8N815 330 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 CCNYQ8ND76 341 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 KIAA1524Q8TCG1 905 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.99■□□□□ 0.47
SMN1-204ENST00000506163 CAAP1Q9H8G2 361 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 RBM22Q9NW64 420 aaKnown RBP eCLIP17.99■□□□□ 0.47
SMN1-204ENST00000506163 PCDHA3Q9Y5H8 950 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 LRRK1Q38SD2 2015 aa17.99■□□□□ 0.47
SMN1-204ENST00000506163 hCG_1818297A0A087WSY0 165 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 UPK3BL1B0FP48 263 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 UPK3BL2E5RIL1 263 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 PRAMEF26H0Y7S4 382 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 KCNK1O00180 336 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 TLR4O00206 839 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 RIOK3O14730 519 aaKnown RBP17.98■□□□□ 0.47
SMN1-204ENST00000506163 HTRA2O43464 458 aaPredicted RBP17.98■□□□□ 0.47
SMN1-204ENST00000506163 CST8O60676 142 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 HLA-DQB2P05538 268 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 PECAM1P16284 738 aaPredicted RBP17.98■□□□□ 0.47
SMN1-204ENST00000506163 NUDT1P36639 197 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 CCZ1BP86790 482 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 CCZ1P86791 482 aaPredicted RBP17.98■□□□□ 0.47
SMN1-204ENST00000506163 BCL2L1Q07817 233 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 NIPAL4Q0D2K0 466 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 KIF5AQ12840 1032 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 TRAF2Q12933 501 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 ZBTB17Q13105 803 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 TMEM52BQ4KMG9 183 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 AADACL2Q6P093 401 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 BRAT1Q6PJG6 821 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 CCDC13Q8IYE1 715 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.98■□□□□ 0.47
SMN1-204ENST00000506163 MFSD2AQ8NA29 543 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 EXD1Q8NHP7 514 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 ARRDC2Q8TBH0 407 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 SEMA3CQ99985 751 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 WRAP53Q9BUR4 548 aaKnown RBP17.98■□□□□ 0.47
SMN1-204ENST00000506163 SCUBE2Q9NQ36 999 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 GOLGA6L6A8MZA4 724 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 NEMP1O14524 444 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 GIPC1O14908 333 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 OPHN1O60890 802 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 JCHAINP01591 159 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 CTNNA2P26232 953 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 SERPINA4P29622 427 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 NXPH1P58417 271 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 DSC2Q02487 901 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 PTPRRQ15256 657 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 SHBQ15464 509 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 ZNF423Q2M1K9 1284 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 TFDP3Q5H9I0 405 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 ALG1LQ6GMV1 187 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 TIGD7Q6NT04 549 aaPredicted RBP17.98■□□□□ 0.47
SMN1-204ENST00000506163 GCNT7Q6ZNI0 430 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 DGLUCYQ7Z3D6 616 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 ADAT2Q7Z6V5 191 aaKnown RBP17.98■□□□□ 0.47
SMN1-204ENST00000506163 PIP4P1Q86T03 277 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 NSMCE1Q8WV22 266 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 CALR3Q96L12 384 aaKnown RBP17.98■□□□□ 0.47
SMN1-204ENST00000506163 BMFQ96LC9 184 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 IL12RB2Q99665 862 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 ATP8A1Q9Y2Q0 1164 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 CAPN6Q9Y6Q1 641 aa17.98■□□□□ 0.47
SMN1-204ENST00000506163 TP53BP1Q12888 1972 aaPredicted RBP17.97■□□□□ 0.47
SMN1-204ENST00000506163 POM121BA6NF01 834 aa17.97■□□□□ 0.47
SMN1-204ENST00000506163 PDHA1P08559 390 aa17.97■□□□□ 0.47
SMN1-204ENST00000506163 ZFXP17010 805 aaPredicted RBP17.97■□□□□ 0.47
SMN1-204ENST00000506163 HNRNPA2B1P22626 353 aaKnown RBP17.97■□□□□ 0.47
SMN1-204ENST00000506163 MMP12P39900 470 aa17.97■□□□□ 0.47
SMN1-204ENST00000506163 C21orf59P57076 290 aa17.97■□□□□ 0.47
SMN1-204ENST00000506163 RALGDSQ12967 914 aa17.97■□□□□ 0.47
SMN1-204ENST00000506163 STAT4Q14765 748 aa17.97■□□□□ 0.47
SMN1-204ENST00000506163 ODF2Q5BJF6 829 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms