RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 NRG1Q02297 640 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 UBXN1Q04323 297 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 CLEC16AQ2KHT3 1053 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 TMEM259Q4ZIN3 620 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 EFHC2Q5JST6 749 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 MANEAQ5SRI9 462 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 FAM72AQ5TYM5 149 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 FAM72DQ6L9T8 149 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 DNAJC24Q6P3W2 148 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 KYAT3Q6YP21 454 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 RAB11FIP2Q7L804 512 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 FAM72BQ86X60 149 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 ARHGEF2Q92974 986 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 BMFQ96LC9 184 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 GBP4Q96PP9 640 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 CCDC3Q9BQI4 270 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 MAGEB5Q9BZ81 275 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 MAGEH1Q9H213 219 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 EPB41L5Q9HCM4 733 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 GPR27Q9NS67 375 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 TMEM248Q9NWD8 314 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 GEMIN8Q9NWZ8 242 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 SIK3Q9Y2K2 1263 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 FADS3Q9Y5Q0 445 aa16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 USP9XQ93008 2570 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-213ENST00000505074 POM121BA6NF01 834 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 TMX2-CTNND1H3BSU7 103 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 FPGTO14772 594 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 BUB1O43683 1085 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 UGT2B4P06133 528 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 UNGP13051 313 aaPredicted RBP16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 JUNDP17535 347 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 DESP17661 470 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 RFC1P35251 1148 aaPredicted RBP16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 UGT1A5P35504 534 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 RABIFP47224 123 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 HDAC4P56524 1084 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 MYL5Q02045 173 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 STX1AQ16623 288 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 ARTNQ5T4W7 220 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 MANEALQ5VSG8 457 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 SLFN11Q7Z7L1 901 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 NLRP14Q86W24 1093 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 OR2AP1Q8NGE2 309 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 BTN2A2Q8WVV5 523 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 ISG20Q96AZ6 181 aaKnown RBP16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 PCDHB18PQ96TA0 734 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 BOCQ9BWV1 1114 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 STRADBQ9C0K7 418 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 IGSF5Q9NSI5 407 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 ANO10Q9NW15 660 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 ITM2BQ9Y287 266 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 PCDHGA4Q9Y5G9 962 aa16.22■□□□□ 0.19
PDLIM7-213ENST00000505074 IGLON5A6NGN9 336 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 C16orf96A6NNT2 1141 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 LGALS16A8MUM7 142 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 GOLGA6L22H0YM25 854 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 CREB3O43889 395 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 GSRP00390 522 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 EPHB2P29323 1055 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 ABL2P42684 1182 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 FGL2Q14314 439 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 ZNF805Q5CZA5 627 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 LRRC73Q5JTD7 316 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 ATXN7L2Q5T6C5 722 aaPredicted RBP16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 WDR59Q6PJI9 974 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 SLC35F3Q8IY50 421 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 PYROXD2Q8N2H3 581 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 C3orf20Q8ND61 904 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 KLHL32Q96NJ5 620 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 MCEEQ96PE7 176 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 RETREG1Q9H6L5 497 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 SPASTQ9UBP0 616 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 KLF15Q9UIH9 416 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 GGT7Q9UJ14 662 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 MAN2B2Q9Y2E5 1009 aa16.21■□□□□ 0.19
PDLIM7-213ENST00000505074 CHD5Q8TDI0 1954 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 NTN3O00634 580 aaPredicted RBP16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 CASC3O15234 703 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 RAD51BO15315 384 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 NVLO15381 856 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 CCP110O43303 1012 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 TSPAN6O43657 245 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 AP1G1O43747 822 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 TMCC1O94876 653 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 CD160O95971 181 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 IGSF6O95976 241 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 JMJD7P0C870 316 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 RAD51Q06609 339 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 PTP4A2Q12974 167 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 PDE1CQ14123 709 aaPredicted RBP16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 ESRP1Q6NXG1 681 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 DCUN1D2Q6PH85 259 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 ZSCAN30Q86W11 494 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 PTRH1Q86Y79 214 aaKnown RBP16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 PHF13Q86YI8 300 aaPredicted RBP16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 ZNF564Q8TBZ8 553 aaPredicted RBP16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 CENPIQ92674 756 aaPredicted RBP16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 NTAN1Q96AB6 310 aa16.2■□□□□ 0.18
PDLIM7-213ENST00000505074 RAB7BQ96AH8 199 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms