RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 NFKB1P19838 968 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 DEKP35659 375 aaKnown RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 CXCL12P48061 93 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 PTPN5P54829 565 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 NAP1L1P55209 391 aaKnown RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 QPCTQ16769 361 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 KAZNQ674X7 775 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 STEAP4Q687X5 459 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 HEATR6Q6AI08 1181 aaKnown RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 CCDC137Q6PK04 289 aaKnown RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 XKR5Q6UX68 686 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZDHHC24Q6UX98 284 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 CAND1Q86VP6 1230 aaKnown RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 TMEM145Q8NBT3 493 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 PIP4K2CQ8TBX8 421 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 GRK7Q8WTQ7 553 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 PRCCQ92733 491 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 CENPTQ96BT3 561 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 TBATAQ96M53 351 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 KLF6Q99612 283 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 RBM22Q9NW64 420 aaKnown RBP eCLIP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZSCAN32Q9NX65 697 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 WHRNQ9P202 907 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 HLA-EP13747 358 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 ADRB3P13945 408 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZNF140P52738 457 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 NRLP54845 237 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 SEC13P55735 322 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 SLC1A5Q15758 541 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 ATXN7L2Q5T6C5 722 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 ITPRIPL1Q6GPH6 555 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 TP53I13Q8NBR0 393 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 DENND6BQ8NEG7 585 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 FAM174AQ8TBP5 190 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 SCG3Q8WXD2 468 aaKnown RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 ART4Q93070 314 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 C16orf45Q96MC5 204 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 ATP13A3Q9H7F0 1226 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 POLMQ9NP87 494 aaPredicted RBP8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 SMOXQ9NWM0 555 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 ADAMTS9Q9P2N4 1935 aa8.35□□□□□ -1.07
CDC42SE2-208ENST00000505065 TRBV5-4A0A0C4DH59 114 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 GJC1P36383 396 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 CSRP3P50461 194 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 STC1P52823 247 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 KIAA1161Q6NSJ0 714 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 LRRC8BQ6P9F7 803 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 GALNT7Q86SF2 657 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 DSG4Q86SJ6 1040 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 NRSN1Q8IZ57 195 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 CCDC114Q96M63 670 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 MTG2Q9H4K7 406 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 CD93Q9NPY3 652 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 TREX1Q9NSU2 369 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 HAUS2Q9NVX0 235 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 NDRG2Q9UN36 371 aaKnown RBP8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 AAR2Q9Y312 384 aaKnown RBP8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 C16orf96A6NNT2 1141 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 UPK3BL1B0FP48 263 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 UPK3BL2E5RIL1 263 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 DNALI1O14645 258 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 HLA-DPA1P20036 260 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 LHCGRP22888 699 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 DYNLT1P63172 113 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 CKAP4Q07065 602 aaKnown RBP8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 FGL2Q14314 439 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 UBXN2BQ14CS0 331 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 FAM46CQ5VWP2 391 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 PMS2CLQ68D20 193 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 SERPINA13PQ6UXR4 307 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 CYS1Q717R9 158 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 FAM71DQ8N9W8 422 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 PTCD2Q8WV60 388 aaKnown RBP8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 BHMTQ93088 406 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 PBXIP1Q96AQ6 731 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 TNKS2Q9H2K2 1166 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 FAM153AQ9UHL3 310 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 TCRBV21S2A2A0A5A6 115 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 KCNK1O00180 336 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 KCNN4O15554 427 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 TSPAN6O43657 245 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 NDST3O95803 873 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 JCHAINP01591 159 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 ZNF30P17039 623 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 HOXD12P35452 270 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 GEMP55040 296 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 RHOAP61586 193 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 AP1B1Q10567 949 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 SIRPB2Q5JXA9 342 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 TMEM31Q5JXX7 168 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 JAMLQ86YT9 394 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 SUMF1Q8NBK3 374 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 KIF18AQ8NI77 898 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 COX14Q96I36 57 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 SEMA3CQ99985 751 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 LRRC40Q9H9A6 602 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 POLR3BQ9NW08 1133 aaPredicted RBP8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 RAI2Q9Y5P3 530 aa8.34□□□□□ -1.07
CDC42SE2-208ENST00000505065 A0A1W2PR77 199 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms