RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ZG16O60844 167 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 KINO60870 393 aaKnown RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 KRT38O76015 456 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 LDHAP00338 332 aaKnown RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 ZNF883P0CG24 379 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 CAPN2P17655 700 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 AMD1P17707 334 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 ZNF10P21506 573 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 PRPH2P23942 346 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 KLRK1P26718 216 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 GSTM2P28161 218 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 KIF5BP33176 963 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 PRPHP41219 470 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 TSPAN7P41732 249 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 TM4SF4P48230 202 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 TRAPPC10P48553 1259 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 RCAN1P53805 252 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 ATP12AP54707 1039 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 ZBTB17Q13105 803 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 DMP1Q13316 513 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 BIRC3Q13489 604 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 PRPF4BQ13523 1007 aaKnown RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 PKP1Q13835 747 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 EIF4A2Q14240 407 aaKnown RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 SMC1AQ14683 1233 aaKnown RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 WTAPQ15007 396 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 TBRG1Q3YBR2 411 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC152Q4G0S7 254 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC184Q52MB2 194 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 COBLL1Q53SF7 1204 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 AP1ARQ63HQ0 302 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 NCAPH2Q6IBW4 605 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC80Q76M96 950 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 SDCCAG8Q86SQ7 713 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 SERPINA11Q86U17 422 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 TRIM74Q86UV6 250 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 TRIM73Q86UV7 250 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 WDR75Q8IWA0 830 aaKnown RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 NAGSQ8N159 534 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 PDCL2Q8N4E4 241 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 ANKRD44Q8N8A2 993 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 NKAIN3Q8N8D7 197 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 TEX45Q8NA69 505 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 DRAXINQ8NBI3 349 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 MIPOL1Q8TD10 442 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAR1Q8WVX9 515 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 TEKT4Q8WW24 435 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 HMGB4Q8WW32 186 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 N4BP2L2Q92802 583 aaPredicted RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 ERP27Q96DN0 273 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 BICD1Q96G01 975 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 PGLYRP2Q96PD5 576 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 FRG2BQ96QU4 278 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 PRPF18Q99633 342 aaKnown RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 NPAS1Q99742 590 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 SH3GL3Q99963 347 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM167BQ9BTA0 163 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 MECRQ9BV79 373 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 TRMT61BQ9BVS5 477 aaKnown RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 NAA15Q9BXJ9 866 aaKnown RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 UNC45AQ9H3U1 944 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 RABEP2Q9H5N1 569 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 GAREM1Q9H706 876 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 DIAPH3Q9NSV4 1193 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 TMEM248Q9NWD8 314 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 CLIC5Q9NZA1 410 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 SEPT10Q9P0V9 454 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 ZMAT5Q9UDW3 170 aaKnown RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM50BQ9Y247 325 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 MRPL11Q9Y3B7 192 aaKnown RBP2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 RABGAP1Q9Y3P9 1069 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 CGNL1Q0VF96 1302 aa2.14□□□□□ -2.07
HMGB3P17-201ENST00000504195 GOLGA6L10A0A0M3HER8 536 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 A0A0U1RQJ8 604 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 MAGEA13PA6NCF6 341 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 AGAP5A6NIR3 686 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 PIP5K1BO14986 540 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 DNPH1O43598 174 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 NCK2O43639 380 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SKAP2O75563 359 aaPredicted RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 RNASEH2AO75792 299 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 BAG2O95816 211 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 KRT18P05783 430 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 FCGR2AP12318 317 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 RPS2P15880 293 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 XBP1P17861 261 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 TYK2P29597 1187 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 RDXP35241 583 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 DDIT3P35638 169 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 HSPA7P48741 367 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 MXI1P50539 228 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 PAPOLAP51003 745 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 MYBPHQ13203 477 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 DDX10Q13206 875 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 ALKBH1Q13686 389 aaKnown RBP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 TNIP1Q15025 636 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 BRD3Q15059 726 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 POSTNQ15063 836 aa2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SAFBQ15424 915 aaKnown RBP eCLIP2.13□□□□□ -2.07
HMGB3P17-201ENST00000504195 SYCP1Q15431 976 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms