RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 RNF11Q9Y3C5 154 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 ARHGEF37A1IGU5 675 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 TMEM233B4DJY2 109 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 H3BNH8 94 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 FBP2O00757 339 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 TRMUO75648 421 aaKnown RBP15.1■□□□□ 0.01
SNF8-203ENST00000504000 USP17L7P0C7H9 530 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 HSPA8P11142 646 aaKnown RBP15.1■□□□□ 0.01
SNF8-203ENST00000504000 BMP2P12643 396 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 CPB1P15086 417 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 LEPRP48357 1165 aaKnown RBP15.1■□□□□ 0.01
SNF8-203ENST00000504000 CDK9P50750 372 aaKnown RBP15.1■□□□□ 0.01
SNF8-203ENST00000504000 CLCN5P51795 746 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 POU6F1Q14863 301 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 SPATS1Q496A3 300 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 PPP4R4Q6NUP7 873 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 GK5Q6ZS86 529 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 ARHGAP12Q8IWW6 846 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 LPGAT1Q92604 370 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 ZUFSPQ96AP4 578 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 SMARCD1Q96GM5 515 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 PCED1BQ96HM7 432 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 ELMO2Q96JJ3 720 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 UBXN10Q96LJ8 280 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 RANBP9Q96S59 729 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 OMDQ99983 421 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 RHOBTB2Q9BYZ6 727 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 TRPC7Q9HCX4 862 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 ARHGEF38Q9NXL2 777 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 FNIP2Q9P278 1114 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 PTBP2Q9UKA9 531 aaKnown RBP15.1■□□□□ 0.01
SNF8-203ENST00000504000 MAGED2Q9UNF1 606 aaPredicted RBP15.1■□□□□ 0.01
SNF8-203ENST00000504000 MYRFQ9Y2G1 1151 aa15.1■□□□□ 0.01
SNF8-203ENST00000504000 DYTNA2CJ06 578 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 PRORSD1PA6NEY8 169 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 CCDC160A6NGH7 325 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 TRIM64CA6NLI5 447 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 BBIP1A8MTZ0 92 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 PTGESO14684 152 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 NRP2O60462 931 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 MAFKO60675 156 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 PAPSS2O95340 614 aaPredicted RBP15.09■□□□□ 0.01
SNF8-203ENST00000504000 IGLV3-25P01717 112 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 HPCAP84074 193 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 IRF5Q13568 498 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 TIGD7Q6NT04 549 aaPredicted RBP15.09■□□□□ 0.01
SNF8-203ENST00000504000 NEPROQ6NW34 567 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 PAOXQ6QHF9 649 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 GPRIN1Q7Z2K8 1008 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 CUZD1Q86UP6 607 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 ATPAF2Q8N5M1 289 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 ARRDC4Q8NCT1 418 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 SPATA22Q8NHS9 363 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 SLCO4A1Q96BD0 722 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 MARK4Q96L34 752 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 SENP8Q96LD8 212 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 C8orf4Q9NR00 106 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 ACSS2Q9NR19 701 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 TBC1D13Q9NVG8 400 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 GTSE1Q9NYZ3 720 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 RSL24D1Q9UHA3 163 aaKnown RBP15.09■□□□□ 0.01
SNF8-203ENST00000504000 CROTQ9UKG9 612 aa15.09■□□□□ 0.01
SNF8-203ENST00000504000 DICER1Q9UPY3 1922 aaKnown RBP15.09■□□□□ 0.01
SNF8-203ENST00000504000 PLXNB2O15031 1838 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 A8MT66 165 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 ZNF701M0R085 212 aaPredicted RBP15.08■□□□□ 0.01
SNF8-203ENST00000504000 GPC4O75487 556 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 ZBTB7AO95365 584 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 STAMBPO95630 424 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 LTA4HP09960 611 aaKnown RBP15.08■□□□□ 0.01
SNF8-203ENST00000504000 CCDC166P0CW27 439 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 CDK4P11802 303 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 IMPDH1P20839 514 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 SLC5A2P31639 672 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 CRYBB1P53674 252 aaPredicted RBP15.08■□□□□ 0.01
SNF8-203ENST00000504000 ZNF460Q14592 562 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 BRMS1LQ5PSV4 323 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 BTBD8Q5XKL5 378 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 ZNF470Q6ECI4 717 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 LARP4Q71RC2 724 aaKnown RBP eCLIP15.08■□□□□ 0.014e-7■■□□□ 13.6
SNF8-203ENST00000504000 HERC6Q8IVU3 1022 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 NUP93Q8N1F7 819 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 PCDH20Q8N6Y1 951 aaKnown RBP15.08■□□□□ 0.01
SNF8-203ENST00000504000 IPMKQ8NFU5 416 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 ADAMTS16Q8TE57 1224 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 TMEM40Q8WWA1 233 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 LRTOMTQ8WZ04 291 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 PPP1R14BQ96C90 147 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 L3HYPDHQ96EM0 354 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 BIRC8Q96P09 236 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 ASB2Q96Q27 587 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 FICDQ9BVA6 458 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 TSPYL2Q9H2G4 693 aaPredicted RBP15.08■□□□□ 0.01
SNF8-203ENST00000504000 CATSPERBQ9H7T0 1116 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 SLC8A2Q9UPR5 921 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 SLC45A1Q9Y2W3 748 aa15.08■□□□□ 0.01
SNF8-203ENST00000504000 BMP10O95393 424 aa15.08■□□□□ 0
SNF8-203ENST00000504000 MT-CYBP00156 380 aaPredicted RBP15.08■□□□□ 0
SNF8-203ENST00000504000 MYL3P08590 195 aa15.08■□□□□ 0
SNF8-203ENST00000504000 C7P10643 843 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms