RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 GALNT3Q14435 633 aa21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 TAF1BQ53T94 588 aaPredicted RBP21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 CEP97Q8IW35 865 aa21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 TMEM151AQ8N4L1 468 aa21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 GABPB2Q8TAK5 448 aaPredicted RBP21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 MRPS31Q92665 395 aaKnown RBP21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 HDAC10Q969S8 669 aa21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 SKA1Q96BD8 255 aa21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.49■■□□□ 1.035e-8■■■□□ 16.6
UBE2D3-216ENST00000503742 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 HEY2Q9UBP5 337 aa21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 RIMKLBQ9ULI2 386 aa21.49■■□□□ 1.03
UBE2D3-216ENST00000503742 SCAMP3O14828 347 aaKnown RBP21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 DNAJC6O75061 913 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 RASSF9O75901 435 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 LUC7L3O95232 432 aaKnown RBP21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 LRG1P02750 347 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 SAT1P21673 171 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 SLC1A6P48664 564 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 PGGT1BP53609 377 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 SLC7A9P82251 487 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 CNSTQ6PJW8 725 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 CCDC149Q6ZUS6 474 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 ASRGL1Q7L266 308 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 PACS2Q86VP3 889 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 CILP2Q8IUL8 1156 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 LMNTD2Q8IXW0 634 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 CENPLQ8N0S6 344 aaPredicted RBP21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 TMA16Q96EY4 203 aaKnown RBP21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 TMEM106CQ9BVX2 250 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 SLC40A1Q9NP59 571 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 FBXO6Q9NRD1 293 aaPredicted RBP21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 CXXC1Q9P0U4 656 aaPredicted RBP21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 ZFP69BQ9UJL9 534 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 ARIH1Q9Y4X5 557 aaPredicted RBP21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 OR51B4Q9Y5P0 310 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 CFAP73A6NFT4 308 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 APOA4P06727 396 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 ADH1AP07327 375 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 C8AP07357 584 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 RALBP11234 206 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 STMN1P16949 149 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 MZF1P28698 734 aaPredicted RBP21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 CRABP2P29373 138 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 AVPR1AP37288 418 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 SCNN1BP51168 640 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 TAS2R39P59534 338 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 POU4F1Q01851 419 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 ZNF789Q5FWF6 425 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 ATG14Q6ZNE5 492 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 TMC7Q7Z402 723 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 CCDC91Q7Z6B0 441 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 CLNKQ7Z7G1 428 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 CARNMT1Q8N4J0 409 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 BLOC1S5Q8TDH9 187 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 EXOC2Q96KP1 924 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 NUDCD1Q96RS6 583 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 FEM1AQ9BSK4 669 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 TXLNGQ9NUQ3 528 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 ACOT9Q9Y305 439 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 IRAK3Q9Y616 596 aa21.48■■□□□ 1.03
UBE2D3-216ENST00000503742 H0Y626 953 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 NRG2O14511 850 aaPredicted RBP21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 SNAP91O60641 907 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 LYPLA1O75608 230 aaPredicted RBP21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 ATP5HO75947 161 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 SBK3P0C264 359 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 CTC1Q2NKJ3 1217 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 FBXW10Q5XX13 1052 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 PTAR1Q7Z6K3 402 aaPredicted RBP21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 MAB21L3Q8N8X9 362 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 KREMEN2Q8NCW0 462 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 SP7Q8TDD2 431 aaPredicted RBP21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 ALG14Q96F25 216 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 ELMO2Q96JJ3 720 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 SORT1Q99523 831 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 OMDQ99983 421 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 ZBED2Q9BTP6 218 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 TDRD1Q9BXT4 1180 aaKnown RBP21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 SCUBE2Q9NQ36 999 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 ARL5AQ9Y689 179 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 PRLP01236 227 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 T-ENOLP0DO92 83 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 ARRB2P32121 409 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 CLCN5P51795 746 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 PRAMEP78395 509 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 NSUN2Q08J23 767 aaKnown RBP eCLIP21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 ITGA9Q13797 1035 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 ZNF460Q14592 562 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 HTR3DQ70Z44 454 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 DNAJC5GQ8N7S2 189 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 OR6P1Q8NGX9 317 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 RDH11Q8TC12 318 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 KCTD4Q8WVF5 259 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 TBATAQ96M53 351 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 GPR78Q96P69 363 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 TASP1Q9H6P5 420 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 DNMT3BQ9UBC3 853 aaKnown RBP21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 MID2Q9UJV3 735 aa21.47■■□□□ 1.03
UBE2D3-216ENST00000503742 TYW5A2RUC4 315 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms