RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 DCAF12L2Q5VW00 463 aa6.11□□□□□ -1.43
NIPBL-203ENST00000503274 IL20RBQ6UXL0 311 aa6.11□□□□□ -1.43
NIPBL-203ENST00000503274 Q6ZTK2 550 aa6.11□□□□□ -1.43
NIPBL-203ENST00000503274 PRSS45Q7RTY3 260 aa6.11□□□□□ -1.43
NIPBL-203ENST00000503274 ZNF366Q8N895 744 aa6.11□□□□□ -1.43
NIPBL-203ENST00000503274 RUFY2Q8WXA3 655 aa6.11□□□□□ -1.43
NIPBL-203ENST00000503274 RBM38Q9H0Z9 239 aaKnown RBP6.11□□□□□ -1.43
NIPBL-203ENST00000503274 GTF2A1LQ9UNN4 478 aa6.11□□□□□ -1.43
NIPBL-203ENST00000503274 SRCAPQ6ZRS2 3230 aa6.11□□□□□ -1.43
NIPBL-203ENST00000503274 TECPR2O15040 1411 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 PIK3C2GO75747 1445 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 YTHDC2Q9H6S0 1430 aaKnown RBP6.1□□□□□ -1.43
NIPBL-203ENST00000503274 RAB3GAP2Q9H2M9 1393 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 C17orf113A0A1B0GUU1 675 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 SPTLC2O15270 562 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 CREB3O43889 395 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 CEP104O60308 925 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 RFX2P48378 723 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 ENTPD1P49961 510 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 CDH12P55289 794 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 ZP1P60852 638 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 MAPK7Q13164 816 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 UBAP2Q5T6F2 1119 aaKnown RBP6.1□□□□□ -1.43
NIPBL-203ENST00000503274 LRCH2Q5VUJ6 765 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 NAA35Q5VZE5 725 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 NCAPH2Q6IBW4 605 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 TMTC1Q8IUR5 882 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 CPXM2Q8N436 756 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 SLC35F5Q8WV83 523 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 HVCN1Q96D96 273 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 URB1-AS1Q96HZ7 61 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 EYA3Q99504 573 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 SLC32A1Q9H598 525 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 CATSPERBQ9H7T0 1116 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 PLAC1Q9HBJ0 212 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 WDR6Q9NNW5 1121 aaKnown RBP6.1□□□□□ -1.43
NIPBL-203ENST00000503274 NCKIPSDQ9NZQ3 722 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 PDP2Q9P2J9 529 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 SLC13A4Q9UKG4 626 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 CDC42BPGQ6DT37 1551 aa6.1□□□□□ -1.43
NIPBL-203ENST00000503274 SETD1AO15047 1707 aaKnown RBP6.09□□□□□ -1.43
NIPBL-203ENST00000503274 GOLGA6L10A0A0M3HER8 536 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 CLDN7O95471 211 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 NTN1O95631 604 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 XBP1P17861 261 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 PGGT1BP53609 377 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 SLC18A2Q05940 514 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 HSP90AB4PQ58FF6 505 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 ZNF549Q6P9A3 640 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 LVRNQ6Q4G3 990 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 FAM83HQ6ZRV2 1179 aaPredicted RBP6.09□□□□□ -1.43
NIPBL-203ENST00000503274 C9orf47Q6ZRZ4 202 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 CHD1LQ86WJ1 897 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 CADM3Q8N126 398 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 PELI3Q8N2H9 469 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 ZMIZ2Q8NF64 920 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 TNIP2Q8NFZ5 429 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 RASSF8Q8NHQ8 419 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 TMEM170AQ8WVE7 144 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 ASB5Q8WWX0 329 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 ELP4Q96EB1 424 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 NAF1Q96HR8 494 aaKnown RBP6.09□□□□□ -1.43
NIPBL-203ENST00000503274 TBATAQ96M53 351 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 PRAM1Q96QH2 718 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 GFM1Q96RP9 751 aaKnown RBP6.09□□□□□ -1.43
NIPBL-203ENST00000503274 LHPPQ9H008 270 aa6.09□□□□□ -1.43
NIPBL-203ENST00000503274 IFT80Q9P2H3 777 aaPredicted RBP6.09□□□□□ -1.43
NIPBL-203ENST00000503274 EIF3AQ14152 1382 aaKnown RBP6.08□□□□□ -1.44
NIPBL-203ENST00000503274 LAMC1P11047 1609 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 CCDC196A0A1B0GTZ2 297 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 ARHGAP10A1A4S6 786 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 BECN2A8MW95 431 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 MS4A18H0YCH9 400 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 I6L893 689 aaPredicted RBP6.08□□□□□ -1.44
NIPBL-203ENST00000503274 EYA2O00167 538 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 SLC25A17O43808 307 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 HNRNPA1P09651 372 aaKnown RBP eCLIP6.08□□□□□ -1.44
NIPBL-203ENST00000503274 CDC25AP30304 524 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 CENPAP49450 140 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 TRAF1Q13077 416 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 TDGQ13569 410 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 EDRF1Q3B7T1 1238 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 OTUD1Q5VV17 481 aaPredicted RBP6.08□□□□□ -1.44
NIPBL-203ENST00000503274 C17orf99Q6UX52 265 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 MON1AQ86VX9 555 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 RBFAQ8N0V3 343 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 TMEM163Q8TC26 289 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 GDPD5Q8WTR4 605 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 NOC3LQ8WTT2 800 aaKnown RBP6.08□□□□□ -1.44
NIPBL-203ENST00000503274 HTRA1Q92743 480 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 CAMK1GQ96NX5 476 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 INTS2Q9H0H0 1204 aaKnown RBP6.08□□□□□ -1.44
NIPBL-203ENST00000503274 EBF3Q9H4W6 596 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 WASH6PQ9NQA3 447 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 TBX20Q9UMR3 447 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 EP400Q96L91 3159 aa6.08□□□□□ -1.44
NIPBL-203ENST00000503274 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.07□□□□□ -1.44
NIPBL-203ENST00000503274 TEX22C9J3V5 150 aa6.07□□□□□ -1.44
NIPBL-203ENST00000503274 KCNJ4P48050 445 aa6.07□□□□□ -1.44
NIPBL-203ENST00000503274 RFX5P48382 616 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms