RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 DAAM2Q86T65 1068 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 SATL1Q86VE3 508 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 VSIG1Q86XK7 387 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 SLC41A1Q8IVJ1 513 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 MAP7D3Q8IWC1 876 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 CHPFQ8IZ52 775 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 DAW1Q8N136 415 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 ZNF843Q8N446 348 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 NAT16Q8N8M0 369 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 UHMK1Q8TAS1 419 aaKnown RBP4.59□□□□□ -1.67
MATR3-202ENST00000502422 FNDC8Q8TC99 324 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 FBXO25Q8TCJ0 367 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 DQX1Q8TE96 717 aaKnown RBP4.59□□□□□ -1.67
MATR3-202ENST00000502422 TAF4BQ92750 862 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 RELTQ969Z4 430 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 HAUS1Q96CS2 278 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 ZNF419Q96HQ0 510 aaPredicted RBP4.59□□□□□ -1.67
MATR3-202ENST00000502422 MYRFLQ96LU7 910 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 NAP1L3Q99457 506 aaPredicted RBP4.59□□□□□ -1.67
MATR3-202ENST00000502422 MSTO1Q9BUK6 570 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 LRRC27Q9C0I9 530 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 RBM38Q9H0Z9 239 aaKnown RBP4.59□□□□□ -1.67
MATR3-202ENST00000502422 UBAP1Q9NZ09 502 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 CLIC5Q9NZA1 410 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 TRPM5Q9NZQ8 1165 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 DEC1Q9P2X7 70 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 ZNF212Q9UDV6 495 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 CROTQ9UKG9 612 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 GTF3C4Q9UKN8 822 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 TDRKHQ9Y2W6 561 aaKnown RBP4.59□□□□□ -1.67
MATR3-202ENST00000502422 PCDHA3Q9Y5H8 950 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 SPO11Q9Y5K1 396 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 AK5Q9Y6K8 562 aa4.59□□□□□ -1.67
MATR3-202ENST00000502422 PCDH15Q96QU1 1955 aa4.59□□□□□ -1.68
MATR3-202ENST00000502422 MYOFQ9NZM1 2061 aa4.59□□□□□ -1.68
MATR3-202ENST00000502422 SMIM31A0A1B0GVY4 71 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 SLC35F4A4IF30 521 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 EIF3FO00303 357 aaPredicted RBP4.58□□□□□ -1.68
MATR3-202ENST00000502422 RASGRF2O14827 1237 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 LSM1O15116 133 aaKnown RBP4.58□□□□□ -1.68
MATR3-202ENST00000502422 FLRT2O43155 660 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 RIPK2O43353 540 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 HUS1O60921 280 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ADAM23O75077 832 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 CBFA2T3O75081 653 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 CYP17A1P05093 508 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ATXN1LP0C7T5 689 aaKnown RBP4.58□□□□□ -1.68
MATR3-202ENST00000502422 SMIM18P0DKX4 95 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 MAPTP10636 758 aaKnown RBP4.58□□□□□ -1.68
MATR3-202ENST00000502422 ADH5P11766 374 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 PLS3P13797 630 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ITPKBP27987 946 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 CRABP2P29373 138 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 NTSR1P30989 418 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 GRIK1P39086 918 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 VPS41P49754 854 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 PSMD7P51665 324 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ARFIP2P53365 341 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 SEMG2Q02383 582 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 GAD2Q05329 585 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ITGA9Q13797 1035 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 SLC18A3Q16572 532 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ANO4Q32M45 955 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ZCWPW2Q504Y3 356 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 CFAP157Q5JU67 520 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 UNC13DQ70J99 1090 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 HS2ST1Q7LGA3 356 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 GPR155Q7Z3F1 870 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 MARCH9Q86YJ5 346 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 SFTPA1Q8IWL2 248 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ZBED8Q8IZ13 594 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 C4orf32Q8N8J7 132 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 TMEM161BQ8NDZ6 487 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 GDAP1Q8TB36 358 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 DTX3LQ8TDB6 740 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 C10orf82Q8WW14 230 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ARHGEF2Q92974 986 aaKnown RBP4.58□□□□□ -1.68
MATR3-202ENST00000502422 GRAMD1AQ96CP6 724 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ERLEC1Q96DZ1 483 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 HSPBAP1Q96EW2 488 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 MAGEB18Q96M61 343 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ZNF560Q96MR9 790 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 PRICKLE1Q96MT3 831 aaPredicted RBP4.58□□□□□ -1.68
MATR3-202ENST00000502422 CITED4Q96RK1 184 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ACBD6Q9BR61 282 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ERP44Q9BS26 406 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.58□□□□□ -1.68
MATR3-202ENST00000502422 ASB7Q9H672 318 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 MMRN2Q9H8L6 949 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 LUC7LQ9NQ29 371 aaKnown RBP4.58□□□□□ -1.68
MATR3-202ENST00000502422 TMLHEQ9NVH6 421 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 SMPD4Q9NXE4 827 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 DPP3Q9NY33 737 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 GCNT4Q9P109 453 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 TBC1D14Q9P2M4 693 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 GMPR2Q9P2T1 348 aaKnown RBP4.58□□□□□ -1.68
MATR3-202ENST00000502422 NENFQ9UMX5 172 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 ZNF148Q9UQR1 794 aa4.58□□□□□ -1.68
MATR3-202ENST00000502422 UTP11Q9Y3A2 253 aaKnown RBP4.58□□□□□ -1.68
MATR3-202ENST00000502422 TIMM22Q9Y584 194 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms