RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CNTN6Q9UQ52 1028 aa9.23□□□□□ -0.93
CCDC171-209ENST00000498725 AHCTF1Q8WYP5 2266 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 FAM237AA0A1B0GTK4 181 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 A0A1W2PQ27 194 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 A0A1W2PQ64 194 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 A0A1W2PQC6 194 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 BECN2A8MW95 431 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 CD160O95971 181 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 TNFP01375 233 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 LIFP15018 202 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 XPAP23025 273 aaPredicted RBP9.22□□□□□ -0.93
CCDC171-209ENST00000498725 ALDH4A1P30038 563 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 CASRP41180 1078 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 CCR10P46092 362 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 PPM1FP49593 454 aaPredicted RBP9.22□□□□□ -0.93
CCDC171-209ENST00000498725 ATP1A2P50993 1020 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 ZFP36L1Q07352 338 aaKnown RBP9.22□□□□□ -0.93
CCDC171-209ENST00000498725 SLC20A2Q08357 652 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 MTA1Q13330 715 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 INPP5AQ14642 412 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 LRRC14Q15048 493 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 POLD3Q15054 466 aaPredicted RBP9.22□□□□□ -0.93
CCDC171-209ENST00000498725 MYLK3Q32MK0 819 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 PTPN20Q4JDL3 420 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 TMEM164Q5U3C3 297 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 LVRNQ6Q4G3 990 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 SPRED1Q7Z699 444 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 ZSCAN30Q86W11 494 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 CREBRFQ8IUR6 639 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 HSCBQ8IWL3 235 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 FAM26EQ8N5C1 309 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 GPR156Q8NFN8 814 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 OR2AP1Q8NGE2 309 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 SMARCE1Q969G3 411 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 NKD1Q969G9 470 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 ARHGEF26Q96DR7 871 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 PDXPQ96GD0 296 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 CCDC34Q96HJ3 373 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 NPY6RQ99463 290 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 APOOQ9BUR5 198 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 ZYG11BQ9C0D3 744 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 DPEP2Q9H4A9 486 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 MRPL40Q9NQ50 206 aaKnown RBP9.22□□□□□ -0.93
CCDC171-209ENST00000498725 NDFIP2Q9NV92 336 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 AKAP7Q9P0M2 348 aaPredicted RBP9.22□□□□□ -0.93
CCDC171-209ENST00000498725 DACH1Q9UI36 760 aa9.22□□□□□ -0.93
CCDC171-209ENST00000498725 GOLGA8SH3BPF8 625 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 STMND1H3BQB6 276 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 PSMA7O14818 248 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 AREL1O15033 823 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 PMM2O15305 246 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 P4HA2O15460 535 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 DUX1O43812 170 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 POP4O95707 220 aaKnown RBP9.21□□□□□ -0.94
CCDC171-209ENST00000498725 PRKCGP05129 697 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 PNMA6AP0CW24 399 aaPredicted RBP9.21□□□□□ -0.94
CCDC171-209ENST00000498725 GLB1P16278 677 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 MPSTP25325 297 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 HTR1BP28222 390 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 KRT9P35527 623 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 MAZP56270 477 aaKnown RBP9.21□□□□□ -0.94
CCDC171-209ENST00000498725 STX17P56962 302 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 OR1D5P58170 312 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 SNRPD1P62314 119 aaKnown RBP9.21□□□□□ -0.94
CCDC171-209ENST00000498725 STIM1Q13586 685 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 NFATC4Q14934 902 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 MEA1Q16626 185 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 WSCD2Q2TBF2 565 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 C14orf28Q4W4Y0 310 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 C2CD6Q53TS8 623 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 FAM102AQ5T9C2 384 aaPredicted RBP9.21□□□□□ -0.94
CCDC171-209ENST00000498725 RWDD4Q6NW29 188 aaKnown RBP9.21□□□□□ -0.94
CCDC171-209ENST00000498725 SLC26A9Q7LBE3 791 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 PHLDB2Q86SQ0 1253 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 PIM3Q86V86 326 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 FAM131BQ86XD5 332 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 SLITRK4Q8IW52 837 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 CACNA2D3Q8IZS8 1091 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 PLA2G15Q8NCC3 412 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 OR6C4Q8NGE1 309 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 CCL4L1Q8NHW4 92 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 C9orf43Q8TAL5 461 aaPredicted RBP9.21□□□□□ -0.94
CCDC171-209ENST00000498725 OR1E3Q8WZA6 343 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 ART4Q93070 314 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 CEP63Q96MT8 703 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 WDR92Q96MX6 357 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 PSMG3-AS1Q96PY0 264 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 NUDT22Q9BRQ3 303 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 SCAND2PQ9GZW5 306 aaPredicted RBP9.21□□□□□ -0.94
CCDC171-209ENST00000498725 ZMYND15Q9H091 742 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 ANAPC2Q9UJX6 822 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 STAP1Q9ULZ2 295 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 CTNND2Q9UQB3 1225 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCDC171-209ENST00000498725 BSNQ9UPA5 3926 aa9.21□□□□□ -0.94
CCDC171-209ENST00000498725 ARHGEF17Q96PE2 2063 aaPredicted RBP9.2□□□□□ -0.94
CCDC171-209ENST00000498725 TLN1Q9Y490 2541 aaKnown RBP9.2□□□□□ -0.94
CCDC171-209ENST00000498725 IGLV3-10A0A075B6K4 115 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 TMEM202A6NGA9 273 aa9.2□□□□□ -0.94
CCDC171-209ENST00000498725 TMEM110-MUSTN1A8MSY1 372 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms