RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 ELP6Q0PNE2 266 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 SPIDRQ14159 915 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 GRM3Q14832 879 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 LRRC14Q15048 493 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 ELOCQ15369 112 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 KLHL40Q2TBA0 621 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 EFHC2Q5JST6 749 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 TPRG1LQ5T0D9 272 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 FOXR1Q6PIV2 292 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 LVRNQ6Q4G3 990 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 CRTC1Q6UUV9 634 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 MACC1Q6ZN28 852 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 SPNS2Q8IVW8 549 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 SLC35F3Q8IY50 421 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 RBFAQ8N0V3 343 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 SDR16C5Q8N3Y7 309 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 FSTL5Q8N475 847 aaPredicted RBP12.17□□□□□ -0.46
CNOT4-211ENST00000498534 CCDC185Q8N715 623 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 RTL3Q8N8U3 475 aaKnown RBP12.17□□□□□ -0.46
CNOT4-211ENST00000498534 WDR36Q8NI36 951 aaKnown RBP12.17□□□□□ -0.46
CNOT4-211ENST00000498534 HCAR2Q8TDS4 363 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 PCMTD1Q96MG8 357 aaPredicted RBP12.17□□□□□ -0.46
CNOT4-211ENST00000498534 EPAS1Q99814 870 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 NCAPGQ9BPX3 1015 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 WRAP53Q9BUR4 548 aaKnown RBP12.17□□□□□ -0.46
CNOT4-211ENST00000498534 CPEB1Q9BZB8 566 aaKnown RBP12.17□□□□□ -0.46
CNOT4-211ENST00000498534 NUP62CLQ9H1M0 184 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 TCEAL2Q9H3H9 227 aaPredicted RBP12.17□□□□□ -0.46
CNOT4-211ENST00000498534 CATSPERBQ9H7T0 1116 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 NLRC4Q9NPP4 1024 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 MBNL1Q9NR56 388 aaKnown RBP12.17□□□□□ -0.46
CNOT4-211ENST00000498534 FAM207AQ9NSI2 230 aaPredicted RBP12.17□□□□□ -0.46
CNOT4-211ENST00000498534 DONSONQ9NYP3 566 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 DAAM1Q9Y4D1 1078 aa12.17□□□□□ -0.46
CNOT4-211ENST00000498534 ZNF462Q96JM2 2506 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 SIGLEC16A6NMB1 481 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 TMX2-CTNND1H3BSU7 103 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 TNFSF15O95150 251 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 ZIC2O95409 532 aaPredicted RBP12.16□□□□□ -0.46
CNOT4-211ENST00000498534 GJB6O95452 261 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 CALB1P05937 261 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 ALPIP09923 528 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 UNGP13051 313 aaPredicted RBP12.16□□□□□ -0.46
CNOT4-211ENST00000498534 DESP17661 470 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 IGFALSP35858 605 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 PARP15Q460N3 678 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 LRRC73Q5JTD7 316 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 PERM1Q5SV97 790 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 CFAP58Q5T655 872 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 WDR59Q6PJI9 974 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 HID1Q8IV36 788 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 ATL2Q8NHH9 583 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 ENOX1Q8TC92 643 aaKnown RBP12.16□□□□□ -0.46
CNOT4-211ENST00000498534 CCDC3Q9BQI4 270 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 LRRC61Q9BV99 259 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 GANQ9H2C0 597 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 SYNDIG1Q9H7V2 258 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 CHMP5Q9NZZ3 219 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 PCDHGA4Q9Y5G9 962 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 RP1P56715 2156 aa12.16□□□□□ -0.46
CNOT4-211ENST00000498534 ATMQ13315 3056 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 CCDC187A0A096LP49 1063 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 RASA4BC9J798 803 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 RASA4O43374 803 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 CREB3O43889 395 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 RASGRP1O95267 797 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 PLA2G2AP14555 144 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 ITIH2P19823 946 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 HK3P52790 923 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 AIF1P55008 147 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 JAM2P57087 298 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 SERINC3Q13530 473 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 KRT31Q15323 416 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 TMEM52BQ4KMG9 183 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 ERAP2Q6P179 960 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 ENPP7Q6UWV6 458 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 CCDC81Q6ZN84 652 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 RD3Q7Z3Z2 195 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 GKN2Q86XP6 184 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 PHF13Q86YI8 300 aaPredicted RBP12.15□□□□□ -0.46
CNOT4-211ENST00000498534 PYROXD2Q8N2H3 581 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 TP53I13Q8NBR0 393 aaPredicted RBP12.15□□□□□ -0.46
CNOT4-211ENST00000498534 C3orf20Q8ND61 904 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 ANKRD20A12PQ8NF67 263 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 OR6C4Q8NGE1 309 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 TSACCQ96A04 125 aaPredicted RBP12.15□□□□□ -0.46
CNOT4-211ENST00000498534 VOPP1Q96AW1 172 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 HMCESQ96FZ2 354 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 ZNF641Q96N77 438 aaPredicted RBP12.15□□□□□ -0.46
CNOT4-211ENST00000498534 EDEM3Q9BZQ6 932 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 STRADBQ9C0K7 418 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 CLPBQ9H078 707 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 SUV39H2Q9H5I1 410 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 NOL6Q9H6R4 1146 aaKnown RBP12.15□□□□□ -0.46
CNOT4-211ENST00000498534 SEPT11Q9NVA2 429 aaKnown RBP12.15□□□□□ -0.46
CNOT4-211ENST00000498534 CHD5Q8TDI0 1954 aa12.15□□□□□ -0.46
CNOT4-211ENST00000498534 A0A1W2PNU3 283 aaPredicted RBP12.14□□□□□ -0.47
CNOT4-211ENST00000498534 CDRT15L2A8MXV6 281 aa12.14□□□□□ -0.47
CNOT4-211ENST00000498534 FGF10O15520 208 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms