RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 ZNF764Q96H86 408 aaPredicted RBP4.24□□□□□ -1.73
USP54-217ENST00000498213 FBXL20Q96IG2 436 aa4.24□□□□□ -1.73
USP54-217ENST00000498213 KLHL32Q96NJ5 620 aa4.24□□□□□ -1.73
USP54-217ENST00000498213 SMOQ99835 787 aa4.24□□□□□ -1.73
USP54-217ENST00000498213 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.24□□□□□ -1.73
USP54-217ENST00000498213 HERC2P3Q9BVR0 1158 aa4.24□□□□□ -1.73
USP54-217ENST00000498213 APOL6Q9BWW8 343 aa4.24□□□□□ -1.73
USP54-217ENST00000498213 SLAMF7Q9NQ25 335 aa4.24□□□□□ -1.73
USP54-217ENST00000498213 AGPAT5Q9NUQ2 364 aa4.24□□□□□ -1.73
USP54-217ENST00000498213 DOCK6Q96HP0 2047 aa4.24□□□□□ -1.73
USP54-217ENST00000498213 MYH6P13533 1939 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 A0A1W2PS29 197 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 MYBPHLA2RUH7 354 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 CLEC18AA5D8T8 446 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 FAM86B1E9PN63 330 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 CBFA2T3O75081 653 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 ATG13O75143 517 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 SLC43A1O75387 559 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 LYPLA2O95372 231 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 APBB3O95704 486 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 CCNE2O96020 404 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 VTNP04004 478 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 FAM86B2P0C5J1 330 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 MUTP22033 750 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 FBLP22087 321 aaKnown RBP4.23□□□□□ -1.73
USP54-217ENST00000498213 PSMA5P28066 241 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 ANXA11P50995 505 aaKnown RBP4.23□□□□□ -1.73
USP54-217ENST00000498213 NLRP11P59045 1033 aaKnown RBP4.23□□□□□ -1.73
USP54-217ENST00000498213 PSMC1P62191 440 aaKnown RBP4.23□□□□□ -1.73
USP54-217ENST00000498213 EXOSC10Q01780 885 aaKnown RBP4.23□□□□□ -1.73
USP54-217ENST00000498213 PPP2R5CQ13362 524 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 ORC2Q13416 577 aaPredicted RBP4.23□□□□□ -1.73
USP54-217ENST00000498213 TFDP1Q14186 410 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 CD300EQ496F6 205 aaPredicted RBP4.23□□□□□ -1.73
USP54-217ENST00000498213 KHDC1Q4VXA5 237 aaKnown RBP4.23□□□□□ -1.73
USP54-217ENST00000498213 THEMIS2Q5TEJ8 643 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 PRSS55Q6UWB4 352 aaPredicted RBP4.23□□□□□ -1.73
USP54-217ENST00000498213 DHRS13Q6UX07 377 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 B3GNT9Q6UX72 402 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 CLEC18BQ6UXF7 455 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 C4orf19Q8IY42 314 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 YAF2Q8IY57 180 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 METTL13Q8N6R0 699 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 FRMD1Q8N878 549 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 EXD3Q8N9H8 876 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 CLEC18CQ8NCF0 446 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 PDPRQ8NCN5 879 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 B3GALNT2Q8NCR0 500 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 EXOC6Q8TAG9 804 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 PSPC1Q8WXF1 523 aaKnown RBP4.23□□□□□ -1.73
USP54-217ENST00000498213 FGF11Q92914 225 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 TCEAL4Q96EI5 215 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 ZFYVE19Q96K21 471 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 MRGPRX4Q96LA9 322 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 MBOAT7Q96N66 472 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 SCLT1Q96NL6 688 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 TSPAN18Q96SJ8 248 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 LGMNQ99538 433 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 VRK1Q99986 396 aaPredicted RBP4.23□□□□□ -1.73
USP54-217ENST00000498213 COLEC11Q9BWP8 271 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 TEKT3Q9BXF9 490 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 AGXT2Q9BYV1 514 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 SLC13A1Q9BZW2 595 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 GPR88Q9GZN0 384 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 C8orf33Q9H7E9 229 aaPredicted RBP4.23□□□□□ -1.73
USP54-217ENST00000498213 GTSE1Q9NYZ3 720 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 GDE1Q9NZC3 331 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 CFAP97Q9P2B7 532 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 SLC17A6Q9P2U8 582 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 POLHQ9Y253 713 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 SPEF1Q9Y4P9 236 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 PCDHB1Q9Y5F3 818 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 NBEAL1Q6ZS30 2694 aa4.23□□□□□ -1.73
USP54-217ENST00000498213 SF3B1O75533 1304 aaKnown RBP eCLIP4.22□□□□□ -1.73
USP54-217ENST00000498213 OTOGQ6ZRI0 2925 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 MUC22E2RYF6 1773 aaPredicted RBP4.22□□□□□ -1.73
USP54-217ENST00000498213 CABIN1Q9Y6J0 2220 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 A1L4Q6 167 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 CCDC151A5D8V7 595 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 ZNF785A8K8V0 405 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 TMEM189-UBE2V1I3L0A0 370 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 TRAPPC3O43617 180 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 CSDE1O75534 798 aaKnown RBP4.22□□□□□ -1.73
USP54-217ENST00000498213 OFD1O75665 1012 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 PSMD10O75832 226 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 ZFPL1O95159 310 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 PLEKHA8P1O95397 391 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 RHOP08100 348 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 JUPP14923 745 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 IFNAR1P17181 557 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 MALP21145 153 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 FOLR3P41439 243 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 RECQLP46063 649 aaPredicted RBP4.22□□□□□ -1.73
USP54-217ENST00000498213 OR1G1P47890 313 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 QARSP47897 775 aaKnown RBP4.22□□□□□ -1.73
USP54-217ENST00000498213 PTH2RP49190 550 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 TMPRSS3P57727 454 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 PRKCEQ02156 737 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 DSC1Q08554 894 aa4.22□□□□□ -1.73
USP54-217ENST00000498213 MYO1EQ12965 1108 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms