RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 OMDQ99983 421 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 TBL1YQ9BQ87 522 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 APOL2Q9BQE5 337 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 RAB17Q9H0T7 212 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 PABPC3Q9H361 631 aaKnown RBP13.69□□□□□ -0.22
CPNE1-227ENST00000498056 SUV39H2Q9H5I1 410 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 LRRC40Q9H9A6 602 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 ETNK1Q9HBU6 452 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 VPS45Q9NRW7 570 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 PPM1HQ9ULR3 514 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 CHKBQ9Y259 395 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 NEU2Q9Y3R4 380 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 PCDHB9Q9Y5E1 797 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 FANCMQ8IYD8 2048 aa13.69□□□□□ -0.22
CPNE1-227ENST00000498056 LAMTOR5O43504 91 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 USP12O75317 370 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 RNASEH2AO75792 299 aaKnown RBP13.68□□□□□ -0.22
CPNE1-227ENST00000498056 AP2A1O95782 977 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 SLC8A1P32418 973 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 CHRNA4P43681 627 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 PXNP49023 591 aaPredicted RBP13.68□□□□□ -0.22
CPNE1-227ENST00000498056 NEK3P51956 506 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 SLC7A5Q01650 507 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 IHHQ14623 411 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 SLC14A2Q15849 920 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 KDELC1Q6UW63 502 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 PPP1R21Q6ZMI0 780 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 ZSWIM9Q86XI8 627 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 SNF8Q96H20 258 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 FEM1CQ96JP0 617 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 MRGPRX2Q96LB1 330 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 ZNF641Q96N77 438 aaPredicted RBP13.68□□□□□ -0.22
CPNE1-227ENST00000498056 LRRC1Q9BTT6 524 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 CD93Q9NPY3 652 aa13.68□□□□□ -0.22
CPNE1-227ENST00000498056 UTP11Q9Y3A2 253 aaKnown RBP13.68□□□□□ -0.22
CPNE1-227ENST00000498056 TNRC6BQ9UPQ9 1833 aaKnown RBP13.68□□□□□ -0.22
CPNE1-227ENST00000498056 A0A0C4DFX4 3053 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.67□□□□□ -0.22
CPNE1-227ENST00000498056 UPK3BL1B0FP48 263 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 UPK3BL2E5RIL1 263 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 TRAFD1O14545 582 aaPredicted RBP13.67□□□□□ -0.22
CPNE1-227ENST00000498056 DNALI1O14645 258 aaPredicted RBP13.67□□□□□ -0.22
CPNE1-227ENST00000498056 PGLSO95336 258 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 SLU7O95391 586 aaKnown RBP13.67□□□□□ -0.22
CPNE1-227ENST00000498056 SLC4A1P02730 911 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 PRKCGP05129 697 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 C5AR1P21730 350 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 GRIA4P48058 902 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 CDK18Q07002 472 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 CNTN1Q12860 1018 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 KCNJ11Q14654 390 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 NAPEPLDQ6IQ20 393 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 FBXL19Q6PCT2 694 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 BRAT1Q6PJG6 821 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 TSSK4Q6SA08 328 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 BMP8AQ7Z5Y6 402 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 FAM124AQ86V42 546 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 HDDC3Q8N4P3 179 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 SLC25A41Q8N5S1 370 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 AADATQ8N5Z0 425 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 CPT1BQ92523 772 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 VOPP1Q96AW1 172 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 TADA1Q96BN2 335 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 RMDN1Q96DB5 314 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 ECHDC3Q96DC8 303 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 ADGRE3Q9BY15 652 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 PRMT8Q9NR22 394 aaPredicted RBP13.67□□□□□ -0.22
CPNE1-227ENST00000498056 EIF2B3Q9NR50 452 aaKnown RBP13.67□□□□□ -0.22
CPNE1-227ENST00000498056 PIH1D1Q9NWS0 290 aaKnown RBP13.67□□□□□ -0.22
CPNE1-227ENST00000498056 SERGEFQ9UGK8 458 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 SNX24Q9Y343 169 aa13.67□□□□□ -0.22
CPNE1-227ENST00000498056 ESYT3A0FGR9 886 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 TSPAN11A1L157 253 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 C16orf96A6NNT2 1141 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 ERI2A8K979 691 aaKnown RBP13.66□□□□□ -0.22
CPNE1-227ENST00000498056 GOLGA8MH3BSY2 632 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 RIOK3O14730 519 aaKnown RBP13.66□□□□□ -0.22
CPNE1-227ENST00000498056 PSMD3O43242 534 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 HTRA2O43464 458 aaPredicted RBP13.66□□□□□ -0.22
CPNE1-227ENST00000498056 TMEM63AO94886 807 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 NDST3O95803 873 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 PDHA1P08559 390 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 RHOXF2BP0C7M4 288 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 ADRB3P13945 408 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 CTPS1P17812 591 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 TPSB2P20231 275 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 DRD3P35462 400 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 P2RY2P41231 377 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 ABL2P42684 1182 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 RPL21P46778 160 aaKnown RBP13.66□□□□□ -0.22
CPNE1-227ENST00000498056 ZBTB16Q05516 673 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 CALCOCO2Q13137 446 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 TPSAB1Q15661 275 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 TMEM31Q5JXX7 168 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 AGBL4Q5VU57 503 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 ANKRD22Q5VYY1 191 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 USP45Q70EL2 814 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 ERN2Q76MJ5 926 aaKnown RBP13.66□□□□□ -0.22
CPNE1-227ENST00000498056 RASSF3Q86WH2 238 aa13.66□□□□□ -0.22
CPNE1-227ENST00000498056 PPIL6Q8IXY8 311 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms