RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 EPHX4Q8IUS5 362 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 CCDC117Q8IWD4 279 aaPredicted RBP3.89□□□□□ -1.79
SMC4-227ENST00000497984 SFTPA2Q8IWL1 248 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 SPEM1Q8N4L4 309 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 FIG4Q92562 907 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 TRAPPC9Q96Q05 1148 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 YME1L1Q96TA2 773 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 MMTAG2Q9BU76 263 aaKnown RBP3.89□□□□□ -1.79
SMC4-227ENST00000497984 NOX4Q9NPH5 578 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 SLC9A2Q9UBY0 812 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 SIX4Q9UIU6 781 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 TCF19Q9Y242 345 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 SNX9Q9Y5X1 595 aa3.89□□□□□ -1.79
SMC4-227ENST00000497984 H0Y3Z8 333 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 SLC25A17O43808 307 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 SERPINC1P01008 464 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 MCM3P25205 808 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 SERPINB3P29508 390 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 CLCN3P51790 818 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 ICA1Q05084 483 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 SMAD1Q15797 465 aaKnown RBP3.88□□□□□ -1.79
SMC4-227ENST00000497984 FBXO43Q4G163 708 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 SYCP2LQ5T4T6 812 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 SULT6B1Q6IMI4 303 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 GJB7Q6PEY0 223 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 SHFQ7M4L6 423 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 MYPOPQ86VE0 399 aaPredicted RBP3.88□□□□□ -1.79
SMC4-227ENST00000497984 ZNF485Q8NCK3 441 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 NCSTNQ92542 709 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 TANKQ92844 425 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 KTI12Q96EK9 354 aaPredicted RBP3.88□□□□□ -1.79
SMC4-227ENST00000497984 SLC39A13Q96H72 371 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 C3orf30Q96M34 536 aa3.88□□□□□ -1.79
SMC4-227ENST00000497984 FBRSL1Q9HCM7 1045 aaKnown RBP3.88□□□□□ -1.79
SMC4-227ENST00000497984 TLR8Q9NR97 1041 aaKnown RBP3.88□□□□□ -1.79
SMC4-227ENST00000497984 A0A0G2JPF8 293 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 HNRNPCL3B7ZW38 293 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 FAM72CH0Y354 149 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 ACKR2O00590 384 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 HNRNPCL1O60812 293 aaKnown RBP3.87□□□□□ -1.79
SMC4-227ENST00000497984 ADAP00813 363 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 ZNF883P0CG24 379 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 HNRNPCL4P0DMR1 293 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 ARSFP54793 590 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 FOXO1Q12778 655 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 MORC3Q14149 939 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 BRD3Q15059 726 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 SYT16Q17RD7 645 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 SH2D4BQ5SQS7 431 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 FAM72AQ5TYM5 149 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 FAM72DQ6L9T8 149 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 NOL8Q76FK4 1167 aaKnown RBP3.87□□□□□ -1.79
SMC4-227ENST00000497984 ZC3HC1Q86WB0 502 aaKnown RBP3.87□□□□□ -1.79
SMC4-227ENST00000497984 FAM72BQ86X60 149 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 SFR1Q86XK3 245 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 ATG16L2Q8NAA4 619 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 DBF4BQ8NFT6 615 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 CREB3L4Q8TEY5 395 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 ZNF501Q96CX3 271 aaPredicted RBP3.87□□□□□ -1.79
SMC4-227ENST00000497984 TTC14Q96N46 770 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 PLCB1Q9NQ66 1216 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 SPATS2LQ9NUQ6 558 aaKnown RBP3.87□□□□□ -1.79
SMC4-227ENST00000497984 VDAC3Q9Y277 283 aa3.87□□□□□ -1.79
SMC4-227ENST00000497984 C16orf97H3BN30 126 aa3.86□□□□□ -1.79
SMC4-227ENST00000497984 MID1O15344 667 aa3.86□□□□□ -1.79
SMC4-227ENST00000497984 ATP1A1P05023 1023 aaKnown RBP3.86□□□□□ -1.79
SMC4-227ENST00000497984 CETPP11597 493 aa3.86□□□□□ -1.79
SMC4-227ENST00000497984 CD72P21854 359 aa3.86□□□□□ -1.79
SMC4-227ENST00000497984 PIGAP37287 484 aa3.86□□□□□ -1.79
SMC4-227ENST00000497984 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
SMC4-227ENST00000497984 KRT72Q14CN4 511 aa3.86□□□□□ -1.79
SMC4-227ENST00000497984 PUM3Q15397 648 aaKnown RBP3.86□□□□□ -1.79
SMC4-227ENST00000497984 TANGO2Q6ICL3 276 aa3.86□□□□□ -1.79
SMC4-227ENST00000497984 TMEM170AQ8WVE7 144 aa3.86□□□□□ -1.79
SMC4-227ENST00000497984 RMDN3Q96TC7 470 aa3.86□□□□□ -1.79
SMC4-227ENST00000497984 CRB3Q9BUF7 120 aa3.86□□□□□ -1.79
SMC4-227ENST00000497984 CTDSP1Q9GZU7 261 aa3.86□□□□□ -1.79
SMC4-227ENST00000497984 G6PC2Q9NQR9 355 aa3.86□□□□□ -1.79
SMC4-227ENST00000497984 COL2A1P02458 1487 aaPredicted RBP3.86□□□□□ -1.79
SMC4-227ENST00000497984 E7EVH7 732 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 SEPT4O43236 478 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 HBP1O60381 514 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 BLMHQ13867 455 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 EFNB3Q15768 340 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 AMZ1Q400G9 498 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 ZNF484Q5JVG2 852 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 NAPEPLDQ6IQ20 393 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 SLC26A9Q7LBE3 791 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 MYLK4Q86YV6 388 aaPredicted RBP3.85□□□□□ -1.79
SMC4-227ENST00000497984 SPICE1Q8N0Z3 855 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 OR13A1Q8NGR1 328 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 TMEM19Q96HH6 336 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 DDX43Q9NXZ2 648 aaKnown RBP3.85□□□□□ -1.79
SMC4-227ENST00000497984 NDRG3Q9UGV2 375 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 KCNS2Q9ULS6 477 aa3.85□□□□□ -1.79
SMC4-227ENST00000497984 TAF1P21675 1872 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.84□□□□□ -1.79
SMC4-227ENST00000497984 EBAG9O00559 213 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 ZIC3O60481 467 aa3.84□□□□□ -1.79
SMC4-227ENST00000497984 NDUFS7O75251 213 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms