RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 A0A0U1RQJ8 604 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 IFITM10A6NMD0 228 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 SRRM3A6NNA2 597 aaPredicted RBP5.83□□□□□ -1.48
SF3B1-212ENST00000496458 SMTNL1A8MU46 457 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 KLRF2D3W0D1 207 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 EDN2P20800 178 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 PIGAP37287 484 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 CLDN2P57739 230 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 RPL36AP83881 106 aaKnown RBP5.83□□□□□ -1.48
SF3B1-212ENST00000496458 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.83□□□□□ -1.48
SF3B1-212ENST00000496458 MYBPHQ13203 477 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 XKR9Q5GH70 373 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 LRRC8DQ7L1W4 858 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 SHFQ7M4L6 423 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 NR2C2APQ86WQ0 139 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 KIAA2013Q8IYS2 634 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 UBXN10Q96LJ8 280 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 C1QTNF4Q9BXJ3 329 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 MYH16Q9H6N6 1097 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 TMEM160Q9NX00 188 aa5.83□□□□□ -1.48
SF3B1-212ENST00000496458 PCNAP12004 261 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 PSMC2P35998 433 aaKnown RBP5.82□□□□□ -1.48
SF3B1-212ENST00000496458 CCT5P48643 541 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 NR1H2P55055 460 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 EFNB1P98172 346 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 EEF1A2Q05639 463 aaKnown RBP5.82□□□□□ -1.48
SF3B1-212ENST00000496458 BIRC3Q13489 604 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 DHX34Q14147 1143 aaKnown RBP5.82□□□□□ -1.48
SF3B1-212ENST00000496458 DHX8Q14562 1220 aaKnown RBP5.82□□□□□ -1.48
SF3B1-212ENST00000496458 SOWAHAQ2M3V2 549 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 SERTAD4-AS1Q5TG53 156 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 SPSB3Q6PJ21 355 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 CYP26C1Q6V0L0 522 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 NEK10Q6ZWH5 1172 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 GPAT4Q86UL3 456 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 PLD5Q8N7P1 536 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 LILRB1Q8NHL6 650 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-212ENST00000496458 ERGIC1Q969X5 290 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 ADGRG7Q96K78 797 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 LRFN5Q96NI6 719 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 GPR63Q9BZJ6 419 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 INTS2Q9H0H0 1204 aaKnown RBP5.82□□□□□ -1.48
SF3B1-212ENST00000496458 CNOT7Q9UIV1 285 aaKnown RBP5.82□□□□□ -1.48
SF3B1-212ENST00000496458 A3GALT2U3KPV4 340 aa5.82□□□□□ -1.48
SF3B1-212ENST00000496458 GOLGA6L10A0A0M3HER8 536 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 A0A0U1RQF3 1178 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 DENND3A2RUS2 1198 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 TPD52L2O43399 206 aaKnown RBP5.81□□□□□ -1.48
SF3B1-212ENST00000496458 GUCY1B2O75343 617 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 URODP06132 367 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 CDH15P55291 814 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 SF3B4Q15427 424 aaKnown RBP eCLIP5.81□□□□□ -1.48
SF3B1-212ENST00000496458 KIF19Q2TAC6 998 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 LRRC8EQ6NSJ5 796 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 TADA2BQ86TJ2 420 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 TICAM2Q86XR7 235 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 PGBD5Q8N414 524 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 MAELQ96JY0 434 aaKnown RBP5.81□□□□□ -1.48
SF3B1-212ENST00000496458 RRN3Q9NYV6 651 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 LUZP4Q9P127 313 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 KIAA1456Q9P272 454 aa5.81□□□□□ -1.48
SF3B1-212ENST00000496458 IGLV5-37A0A075B6J1 123 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 A0A1B0GUV1 79 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 hDV102S1A0JD36 115 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 TEX22C9J3V5 150 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 POLBP06746 335 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 POU1F1P28069 291 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 SSTR2P30874 369 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 PPM1FP49593 454 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-212ENST00000496458 PEX5P50542 639 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 ERVFC1-1P60608 527 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 VEPH1Q14D04 833 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 TAF11Q15544 211 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 ZNF766Q5HY98 468 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 RHBDF2Q6PJF5 856 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 TMED8Q6PL24 325 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-212ENST00000496458 NOC3LQ8WTT2 800 aaKnown RBP5.8□□□□□ -1.48
SF3B1-212ENST00000496458 IGSF21Q96ID5 467 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 SIN3AQ96ST3 1273 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 MXRA8Q9BRK3 442 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 BEX4Q9NWD9 120 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-212ENST00000496458 CISD1Q9NZ45 108 aaKnown RBP5.8□□□□□ -1.48
SF3B1-212ENST00000496458 MALT1Q9UDY8 824 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 CARD8Q9Y2G2 431 aa5.8□□□□□ -1.48
SF3B1-212ENST00000496458 HSPA12AO43301 675 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 KLK8O60259 260 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 AFPP02771 609 aaKnown RBP5.79□□□□□ -1.48
SF3B1-212ENST00000496458 GALTP07902 379 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 IFIT1P09914 478 aaKnown RBP5.79□□□□□ -1.48
SF3B1-212ENST00000496458 DAOP14920 347 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 ITGADQ13349 1161 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 SNTA1Q13424 505 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 FAM69BQ5VUD6 431 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 TMEM81Q6P7N7 255 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 DLK2Q6UY11 383 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 ZC3HC1Q86WB0 502 aaKnown RBP5.79□□□□□ -1.48
SF3B1-212ENST00000496458 TMTC1Q8IUR5 882 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 ZNF114Q8NC26 417 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 SNAPC3Q92966 411 aa5.79□□□□□ -1.48
SF3B1-212ENST00000496458 MTBPQ96DY7 904 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms