RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 FZD2Q14332 565 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 NFKBIBQ15653 356 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 SLC18A3Q16572 532 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 PROX2Q3B8N5 592 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 LRRC73Q5JTD7 316 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 ERAP2Q6P179 960 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 NETO2Q8NC67 525 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 OR4C6Q8NH72 309 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 ZNF564Q8TBZ8 553 aaPredicted RBP15.88■□□□□ 0.13
HDAC4-213ENST00000496347 HSPH1Q92598 858 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 CENPTQ96BT3 561 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 BMFQ96LC9 184 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 PSKH2Q96QS6 385 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 TSPY26PQ9H489 355 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 SUV39H2Q9H5I1 410 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 DNAJC28Q9NX36 388 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 UVRAGQ9P2Y5 699 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 LRP4O75096 1905 aa15.88■□□□□ 0.13
HDAC4-213ENST00000496347 LAMA5O15230 3695 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 SSU72P8A0A1W2PR75 194 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 RIOK3O14730 519 aaKnown RBP15.87■□□□□ 0.13
HDAC4-213ENST00000496347 TPM1P09493 284 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 RARAP10276 462 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 ALPPL2P10696 532 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 TIMP2P16035 220 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 CKMT2P17540 419 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 HNF1BP35680 557 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 RENBPP51606 427 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 NSUN2Q08J23 767 aaKnown RBP eCLIP15.87■□□□□ 0.13
HDAC4-213ENST00000496347 PDE1CQ14123 709 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-213ENST00000496347 UGP2Q16851 508 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 TMEM52BQ4KMG9 183 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 CCDC122Q5T0U0 273 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 DHRS13Q6UX07 377 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 TMPRSS12Q86WS5 348 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 ATPAF2Q8N5M1 289 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 TSEN2Q8NCE0 465 aaKnown RBP15.87■□□□□ 0.13
HDAC4-213ENST00000496347 ZNF548Q8NEK5 533 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-213ENST00000496347 CTNNBL1Q8WYA6 563 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-213ENST00000496347 SPOCK2Q92563 424 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 ECHDC3Q96DC8 303 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 PCDH18Q9HCL0 1135 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 PCDH12Q9NPG4 1184 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 NLGN3Q9NZ94 848 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 ATP8A1Q9Y2Q0 1164 aa15.87■□□□□ 0.13
HDAC4-213ENST00000496347 NEMP2A6NFY4 417 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 CSF2P04141 144 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 ACP1P24666 158 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 IGFALSP35858 605 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 EIF4A3P38919 411 aaKnown RBP15.86■□□□□ 0.13
HDAC4-213ENST00000496347 RGRP47804 291 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 DNAJC3Q13217 504 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 PTK2BQ14289 1009 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 KRT81Q14533 505 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 ZNF235Q14590 738 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 HADHQ16836 314 aaKnown RBP15.86■□□□□ 0.13
HDAC4-213ENST00000496347 CCDC157Q569K6 752 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 ARHGAP36Q6ZRI8 547 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 SRLQ86TD4 932 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 SLC25A45Q8N413 288 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 OR8K1Q8NGG5 319 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 FAM71BQ8TC56 605 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 BTBD6Q96KE9 485 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 TBATAQ96M53 351 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 WRAP53Q9BUR4 548 aaKnown RBP15.86■□□□□ 0.13
HDAC4-213ENST00000496347 DUSP23Q9BVJ7 150 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 DEF6Q9H4E7 631 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 USP29Q9HBJ7 922 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 EVA1BQ9NVM1 165 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 ZNHIT6Q9NWK9 470 aaKnown RBP15.86■□□□□ 0.13
HDAC4-213ENST00000496347 DKK4Q9UBT3 224 aa15.86■□□□□ 0.13
HDAC4-213ENST00000496347 CFAP69A5D8W1 941 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 TRIM38O00635 465 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 FFAR2O15552 330 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 SIGLEC6O43699 453 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 MMP20O60882 483 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 MFAP3LO75121 409 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 SOCS5O75159 536 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 H2AFZP0C0S5 128 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 C6P13671 934 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 MAN1A1P33908 653 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 THOP1P52888 689 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 CDH6P55285 790 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 YPEL5P62699 121 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 BCL2L1Q07817 233 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 LBRQ14739 615 aaKnown RBP15.85■□□□□ 0.13
HDAC4-213ENST00000496347 AGERQ15109 404 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 IRF4Q15306 451 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 TXNRD3NBQ6F5E7 133 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 MACC1Q6ZN28 852 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 H2AFVQ71UI9 128 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 CAMK1DQ8IU85 385 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 LRRC49Q8IUZ0 686 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 VSTM4Q8IW00 320 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 BBS5Q8N3I7 341 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 FAM181AQ8N9Y4 354 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 TP53I13Q8NBR0 393 aaPredicted RBP15.85■□□□□ 0.13
HDAC4-213ENST00000496347 MGME1Q9BQP7 344 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 ZNF670Q9BS34 389 aa15.85■□□□□ 0.13
HDAC4-213ENST00000496347 UCKL1Q9NWZ5 548 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms