RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 BLMHQ13867 455 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 CSHL1Q14406 222 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 LBRQ14739 615 aaKnown RBP11.16□□□□□ -0.62
CMSS1-208ENST00000496116 LSM12Q3MHD2 195 aaKnown RBP11.16□□□□□ -0.62
CMSS1-208ENST00000496116 SPATA6LQ8N4H0 392 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 AFAP1L2Q8N4X5 818 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 TTC9BQ8N6N2 239 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 CCNYL1Q8N7R7 359 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 RP9Q8TA86 221 aaKnown RBP11.16□□□□□ -0.62
CMSS1-208ENST00000496116 NUF2Q9BZD4 464 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 UXTQ9UBK9 157 aaPredicted RBP11.16□□□□□ -0.62
CMSS1-208ENST00000496116 SRRDQ9UH36 339 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 LRCH1Q9Y2L9 728 aa11.16□□□□□ -0.62
CMSS1-208ENST00000496116 A0A1W2PQ45 241 aaPredicted RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 A0A1W2PQY0 241 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 RGSL1A5PLK6 1076 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 H7C4K7 107 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 IGLV3-27P01718 113 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 MMP2P08253 660 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 HMBSP08397 361 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 LTA4HP09960 611 aaKnown RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 FGFR3P22607 806 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 EPHA3P29320 983 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 SERINC3Q13530 473 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 PGM2L1Q6PCE3 622 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 C16orf89Q6UX73 402 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 LRRC8DQ7L1W4 858 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 PTAR1Q7Z6K3 402 aaPredicted RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 CILP2Q8IUL8 1156 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 FBXW8Q8N3Y1 598 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 OR13J1Q8NGT2 312 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 OR6P1Q8NGX9 317 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 C2orf15Q8WU43 125 aaKnown RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 PEX13Q92968 403 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 IFT43Q96FT9 208 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 LENG8Q96PV6 779 aaPredicted RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 CDK5RAP1Q96SZ6 601 aaKnown RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 GPR62Q9BZJ7 368 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 MFSD1Q9H3U5 465 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 POMKQ9H5K3 350 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 WDR55Q9H6Y2 383 aaPredicted RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 EML4Q9HC35 981 aaKnown RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 MRGBPQ9NV56 204 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 SLC27A5Q9Y2P5 690 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 WASF2Q9Y6W5 498 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 LOC285095A0A1B0GVY8 99 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 MROH6A6NGR9 719 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 GRID2O43424 1007 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 SELPP16109 830 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 PIK3R1P27986 724 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 CCR10P46092 362 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 MRPS35P82673 323 aaKnown RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 CAP1Q01518 475 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 MSLNQ13421 630 aaPredicted RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 ZNF235Q14590 738 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 ACAP2Q15057 778 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 SIRPB2Q5JXA9 342 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 RBM20Q5T481 1227 aaKnown RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 RASIP1Q5U651 963 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 NXNQ6DKJ4 435 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 TRIM67Q6ZTA4 783 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 LSMEM2Q8N112 164 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 BBS5Q8N3I7 341 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 CPSF7Q8N684 471 aaKnown RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 SLC43A3Q8NBI5 491 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 ARRDC2Q8TBH0 407 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 TADA1Q96BN2 335 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 MOCOSQ96EN8 888 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 PPP1R36Q96LQ0 422 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 SERPINI1Q99574 410 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 NDNQ99608 321 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 TTC1Q99614 292 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 ZNF184Q99676 751 aaPredicted RBP11.15□□□□□ -0.62
CMSS1-208ENST00000496116 S100A14Q9HCY8 104 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 IGSF5Q9NSI5 407 aa11.15□□□□□ -0.62
CMSS1-208ENST00000496116 F5H5T6 163 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 AURKAO14965 403 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 SOAT2O75908 522 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 IPO13O94829 963 aaKnown RBP11.14□□□□□ -0.63
CMSS1-208ENST00000496116 BAG2O95816 211 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 FGF1P05230 155 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 CCDC166P0CW27 439 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 HLA-DPA1P20036 260 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 ETFBP38117 255 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 SLC26A3P40879 764 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 KLC1Q07866 573 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 CYLC2Q14093 348 aaPredicted RBP11.14□□□□□ -0.63
CMSS1-208ENST00000496116 BTG3Q14201 252 aaPredicted RBP11.14□□□□□ -0.63
CMSS1-208ENST00000496116 SLC14A2Q15849 920 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 TECRLQ5HYJ1 363 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 SH2D4BQ5SQS7 431 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 HECTD2Q5U5R9 776 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 FUT10Q6P4F1 479 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 ADGRG6Q86SQ4 1221 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 RNF135Q8IUD6 432 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 SLC22A9Q8IVM8 553 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 KIRREL3Q8IZU9 778 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 TXNDC5Q8NBS9 432 aaKnown RBP11.14□□□□□ -0.63
CMSS1-208ENST00000496116 RAET1EQ8TD07 263 aa11.14□□□□□ -0.63
CMSS1-208ENST00000496116 MIEF2Q96C03 454 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms