RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 DARS2Q6PI48 645 aaKnown RBP19.6■□□□□ 0.73
HDAC4-212ENST00000495497 HCAR2Q8TDS4 363 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 ATG4AQ8WYN0 398 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 ECHDC3Q96DC8 303 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 TEKT5Q96M29 485 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 ORAI3Q9BRQ5 295 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 PCED1AQ9H1Q7 454 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 KDM4CQ9H3R0 1056 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 PREBQ9HCU5 417 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 RAI2Q9Y5P3 530 aa19.6■□□□□ 0.73
HDAC4-212ENST00000495497 UPK3BL1B0FP48 263 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 UPK3BL2E5RIL1 263 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 NEMP1O14524 444 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 HTRA2O43464 458 aaPredicted RBP19.59■□□□□ 0.73
HDAC4-212ENST00000495497 CEP104O60308 925 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 XPAP23025 273 aaPredicted RBP19.59■□□□□ 0.73
HDAC4-212ENST00000495497 CD68P34810 354 aaPredicted RBP19.59■□□□□ 0.73
HDAC4-212ENST00000495497 CCR5P51681 352 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 SKOR1P84550 965 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 RALGPS1Q5JS13 557 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 TCEAL6Q6IPX3 200 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 BRAT1Q6PJG6 821 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 SYT12Q8IV01 421 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 CDKL3Q8IVW4 592 aaPredicted RBP19.59■□□□□ 0.73
HDAC4-212ENST00000495497 ZNF567Q8N184 647 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 ZCCHC9Q8N567 271 aaKnown RBP19.59■□□□□ 0.73
HDAC4-212ENST00000495497 TTC13Q8NBP0 860 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 DNASE2BQ8WZ79 361 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 TCEAL3Q969E4 200 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 RAB7BQ96AH8 199 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 RBM15Q96T37 977 aaKnown RBP eCLIP19.59■□□□□ 0.73
HDAC4-212ENST00000495497 GLOD4Q9HC38 313 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 PCDH12Q9NPG4 1184 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 KLHL8Q9P2G9 620 aaPredicted RBP19.59■□□□□ 0.73
HDAC4-212ENST00000495497 PCDHB9Q9Y5E1 797 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 PCDHGA5Q9Y5G8 931 aa19.59■□□□□ 0.73
HDAC4-212ENST00000495497 AREL1O15033 823 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 KCNN4O15554 427 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 AP1G1O43747 822 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 SOCS5O75159 536 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 CPP00450 1065 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 PDHA1P08559 390 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 TGM1P22735 817 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 CES1P23141 567 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 PTPRRQ15256 657 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 PLA2G2CQ5R387 149 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 PEAR1Q5VY43 1037 aaPredicted RBP19.58■□□□□ 0.72
HDAC4-212ENST00000495497 PID1Q7Z2X4 250 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 PRPF39Q86UA1 669 aaKnown RBP19.58■□□□□ 0.72
HDAC4-212ENST00000495497 TRIM69Q86WT6 500 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 HORMAD1Q86X24 394 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 SPATA22Q8NHS9 363 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 C1orf54Q8WWF1 131 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 SMIM14Q96QK8 99 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 WRAP53Q9BUR4 548 aaKnown RBP19.58■□□□□ 0.72
HDAC4-212ENST00000495497 FSCN3Q9NQT6 498 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 HAUS2Q9NVX0 235 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 DNPEPQ9ULA0 475 aa19.58■□□□□ 0.72
HDAC4-212ENST00000495497 ZFHX2Q9C0A1 2572 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-212ENST00000495497 A0A1W2PPC4 97 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 A8MX80 341 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 RIOK3O14730 519 aaKnown RBP19.57■□□□□ 0.72
HDAC4-212ENST00000495497 WNT9AO14904 365 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 MTSS1O43312 755 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 MMP20O60882 483 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 PGLSO95336 258 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 FGGP02679 453 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 SERPINF2P08697 491 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 PRLRP16471 622 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 NFKB1P19838 968 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 CD27P26842 260 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 GNG11P61952 73 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 FAM193AP78312 1265 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 SF3A2Q15428 464 aaKnown RBP19.57■□□□□ 0.72
HDAC4-212ENST00000495497 SIX1Q15475 284 aaPredicted RBP19.57■□□□□ 0.72
HDAC4-212ENST00000495497 ARMC12Q5T9G4 340 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 C1orf216Q8TAB5 229 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 SLC35B2Q8TB61 432 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 IMP4Q96G21 291 aaKnown RBP19.57■□□□□ 0.72
HDAC4-212ENST00000495497 MS4A14Q96JA4 679 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 FEM1CQ96JP0 617 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 TDRD1Q9BXT4 1180 aaKnown RBP19.57■□□□□ 0.72
HDAC4-212ENST00000495497 SLC25A51Q9H1U9 297 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 USP29Q9HBJ7 922 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 SEMA4GQ9NTN9 838 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 UBP1Q9NZI7 540 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 CHKBQ9Y259 395 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 SPAG17Q6Q759 2223 aa19.57■□□□□ 0.72
HDAC4-212ENST00000495497 IGLON5A6NGN9 336 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 SLC31A1O15431 190 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 LATO43561 262 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 TSPAN6O43657 245 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 FZD6O60353 706 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 MT-CYBP00156 380 aaPredicted RBP19.56■□□□□ 0.72
HDAC4-212ENST00000495497 PRLP01236 227 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 CTPS1P17812 591 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 SNX1Q13596 522 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 FGL2Q14314 439 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 LONRF2Q1L5Z9 754 aa19.56■□□□□ 0.72
HDAC4-212ENST00000495497 ZNF284Q2VY69 593 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms