RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 TSNARE1Q96NA8 513 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 PSKH2Q96QS6 385 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 SRPK1Q96SB4 655 aaKnown RBP10.36□□□□□ -0.75
HDAC3-214ENST00000495485 CYP2S1Q96SQ9 504 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 SEMA3CQ99985 751 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 GORASP1Q9BQQ3 440 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 TRMT61BQ9BVS5 477 aaKnown RBP10.36□□□□□ -0.75
HDAC3-214ENST00000495485 ADGRE3Q9BY15 652 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 ACE2Q9BYF1 805 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-214ENST00000495485 SCUBE2Q9NQ36 999 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 KIAA1522Q9P206 1035 aaPredicted RBP10.36□□□□□ -0.75
HDAC3-214ENST00000495485 WNT16Q9UBV4 365 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 DCDC2Q9UHG0 476 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 RIMKLBQ9ULI2 386 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 GRID1Q9ULK0 1009 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 TCAF1Q9Y4C2 921 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 NUMBLQ9Y6R0 609 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 CACNA1HO95180 2353 aa10.36□□□□□ -0.75
HDAC3-214ENST00000495485 LOC285095A0A1B0GVY8 99 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 A0A1W2PPM1 405 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 HEPACAM2A8MVW5 462 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 TYROBPO43914 113 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 SPAG7O75391 227 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 CRTAMO95727 393 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 MPOP05164 745 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 GSTA1P08263 222 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 FCARP24071 287 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 ACVRL1P37023 503 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 CRADDP78560 199 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 SIGLEC14Q08ET2 396 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 USP4Q13107 963 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 SLC1A5Q15758 541 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 PCSK7Q16549 785 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 INSCQ1MX18 579 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 PREPLQ4J6C6 727 aaPredicted RBP10.35□□□□□ -0.75
HDAC3-214ENST00000495485 ALG1LQ6GMV1 187 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 KIAA0930Q6ICG6 404 aaPredicted RBP10.35□□□□□ -0.75
HDAC3-214ENST00000495485 KDELC1Q6UW63 502 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 KYAT3Q6YP21 454 aaKnown RBP10.35□□□□□ -0.75
HDAC3-214ENST00000495485 KIAA0408Q6ZU52 694 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 LCA5Q86VQ0 697 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 CACNA2D3Q8IZS8 1091 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 C4orf33Q8N1A6 199 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 SLC44A3Q8N4M1 653 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.35□□□□□ -0.75
HDAC3-214ENST00000495485 DCAF4L2Q8NA75 395 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 ZNF473Q8WTR7 871 aaKnown RBP10.35□□□□□ -0.75
HDAC3-214ENST00000495485 EDAQ92838 391 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 FGF14Q92915 247 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 ZFRQ96KR1 1074 aaKnown RBP10.35□□□□□ -0.75
HDAC3-214ENST00000495485 PRICKLE1Q96MT3 831 aaPredicted RBP10.35□□□□□ -0.75
HDAC3-214ENST00000495485 NUDCD1Q96RS6 583 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 MGME1Q9BQP7 344 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 VPS11Q9H270 941 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 C8orf33Q9H7E9 229 aaPredicted RBP10.35□□□□□ -0.75
HDAC3-214ENST00000495485 PDFQ9HBH1 243 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 CHRAC1Q9NRG0 131 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 CFAP97Q9P2B7 532 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 CDH22Q9UJ99 828 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 MID2Q9UJV3 735 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 VPS28Q9UK41 221 aa10.35□□□□□ -0.75
HDAC3-214ENST00000495485 ZCWPW2A0A1B0GU75 182 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.34□□□□□ -0.75
HDAC3-214ENST00000495485 ERICH4A6NGS2 130 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 CXorf49A8MYA2 514 aaPredicted RBP10.34□□□□□ -0.75
HDAC3-214ENST00000495485 LEFTY2O00292 366 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 MAN2B1O00754 1011 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 INSIG1O15503 277 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 GLRA3O75311 464 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 KIAA0754O94854 1291 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 NFATC1O95644 943 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 NDST3O95803 873 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 ITGA2BP08514 1039 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 ERVK-10P10266 1014 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 PYGBP11216 843 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 TPH1P17752 444 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 HOXD9P28356 352 aaPredicted RBP10.34□□□□□ -0.75
HDAC3-214ENST00000495485 TYK2P29597 1187 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 SERPINB8P50452 374 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 KPNA2P52292 529 aaKnown RBP10.34□□□□□ -0.75
HDAC3-214ENST00000495485 ZXDAP98168 799 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 DSC2Q02487 901 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 PRKCQQ04759 706 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 SULT2A1Q06520 285 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 SEPT6Q14141 434 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 POU6F1Q14863 301 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 ZNF77Q15935 545 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 PDK4Q16654 411 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 TEDDM1Q5T9Z0 273 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 MROH9Q5TGP6 573 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 FYB2Q5VWT5 728 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 ATG16L1Q676U5 607 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 TANGO2Q6ICL3 276 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 TRMT10BQ6PF06 316 aaKnown RBP10.34□□□□□ -0.75
HDAC3-214ENST00000495485 LVRNQ6Q4G3 990 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 PARM1Q6UWI2 310 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 RGS9BPQ6ZS82 235 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 CCDC91Q7Z6B0 441 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 STRA8Q7Z7C7 330 aa10.34□□□□□ -0.75
HDAC3-214ENST00000495485 NDUFAF2Q8N183 169 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms