RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 PNMA8BQ9ULN7 279 aaPredicted RBP23.49■■□□□ 1.35
COL27A1-208ENST00000494780 GCN1Q92616 2671 aaKnown RBP23.48■■□□□ 1.35
COL27A1-208ENST00000494780 MUSKO15146 869 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 ITIH2P19823 946 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 HTR7P34969 479 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 PEX5P50542 639 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 BLKP51451 505 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 PPARDQ03181 441 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 GRM3Q14832 879 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 CYTH1Q15438 398 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 PERM1Q5SV97 790 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 PPP1R15BQ5SWA1 713 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 DNAAF5Q86Y56 855 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 SLC35F3Q8IY50 421 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 NETO2Q8NC67 525 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 KCNE4Q8WWG9 221 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 NCAPGQ9BPX3 1015 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 DONSONQ9NYP3 566 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 SATB2Q9UPW6 733 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 ENTPD2Q9Y5L3 495 aa23.48■■□□□ 1.35
COL27A1-208ENST00000494780 COL27A1Q8IZC6 1860 aaPredicted RBP23.47■■□□□ 1.35
COL27A1-208ENST00000494780 TSPAN11A1L157 253 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 TMEM110-MUSTN1A8MSY1 372 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 YY2O15391 372 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 INSIG1O15503 277 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 TSHRP16473 764 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 DESP17661 470 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 TMPRSS3P57727 454 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 RPL7AP62424 266 aaKnown RBP23.47■■□□□ 1.35
COL27A1-208ENST00000494780 IRF4Q15306 451 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 C3orf38Q5JPI3 329 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 FSTL5Q8N475 847 aaPredicted RBP23.47■■□□□ 1.35
COL27A1-208ENST00000494780 ATXN7L3BQ96GX2 97 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 VCPIP1Q96JH7 1222 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 ERGIC2Q96RQ1 377 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 DPH1Q9BZG8 443 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 CLPBQ9H078 707 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 UBA2Q9UBT2 640 aaPredicted RBP23.47■■□□□ 1.35
COL27A1-208ENST00000494780 PCDHGA8Q9Y5G5 932 aa23.47■■□□□ 1.35
COL27A1-208ENST00000494780 C1QL1O75973 258 aa23.46■■□□□ 1.35
COL27A1-208ENST00000494780 PIGNO95427 931 aa23.46■■□□□ 1.35
COL27A1-208ENST00000494780 RBMS1P29558 406 aaKnown RBP23.46■■□□□ 1.35
COL27A1-208ENST00000494780 MYL5Q02045 173 aa23.46■■□□□ 1.35
COL27A1-208ENST00000494780 UBXN1Q04323 297 aa23.46■■□□□ 1.35
COL27A1-208ENST00000494780 LRRC14Q15048 493 aa23.46■■□□□ 1.35
COL27A1-208ENST00000494780 ESRP1Q6NXG1 681 aaKnown RBP23.46■■□□□ 1.35
COL27A1-208ENST00000494780 DCUN1D2Q6PH85 259 aa23.46■■□□□ 1.35
COL27A1-208ENST00000494780 CRTC1Q6UUV9 634 aa23.46■■□□□ 1.35
COL27A1-208ENST00000494780 EXOC2Q96KP1 924 aa23.46■■□□□ 1.35
COL27A1-208ENST00000494780 SLC46A1Q96NT5 459 aa23.46■■□□□ 1.35
COL27A1-208ENST00000494780 SUV39H2Q9H5I1 410 aa23.46■■□□□ 1.35
COL27A1-208ENST00000494780 PDFQ9HBH1 243 aa23.46■■□□□ 1.35
COL27A1-208ENST00000494780 PADI4Q9UM07 663 aa23.46■■□□□ 1.35
COL27A1-208ENST00000494780 A0A1W2PNU3 283 aaPredicted RBP23.45■■□□□ 1.34
COL27A1-208ENST00000494780 LRRC10BA6NIK2 292 aa23.45■■□□□ 1.34
COL27A1-208ENST00000494780 CCDC172P0C7W6 258 aa23.45■■□□□ 1.34
COL27A1-208ENST00000494780 ELOCQ15369 112 aa23.45■■□□□ 1.34
COL27A1-208ENST00000494780 UGP2Q16851 508 aa23.45■■□□□ 1.34
COL27A1-208ENST00000494780 WSCD2Q2TBF2 565 aa23.45■■□□□ 1.34
COL27A1-208ENST00000494780 ACAD10Q6JQN1 1059 aa23.45■■□□□ 1.34
COL27A1-208ENST00000494780 LVRNQ6Q4G3 990 aa23.45■■□□□ 1.34
COL27A1-208ENST00000494780 MCOLN2Q8IZK6 566 aa23.45■■□□□ 1.34
COL27A1-208ENST00000494780 ZNF641Q96N77 438 aaPredicted RBP23.45■■□□□ 1.34
COL27A1-208ENST00000494780 LRRC19Q9H756 370 aa23.45■■□□□ 1.34
COL27A1-208ENST00000494780 ANO10Q9NW15 660 aa23.45■■□□□ 1.34
COL27A1-208ENST00000494780 DOLKQ9UPQ8 538 aa23.45■■□□□ 1.34
COL27A1-208ENST00000494780 BPTFQ12830 3046 aa23.45■■□□□ 1.34
COL27A1-208ENST00000494780 ALPIP09923 528 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 C6P13671 934 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 HTR1BP28222 390 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 HK3P52790 923 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 NDST2P52849 883 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 TPI1P60174 286 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 AGERQ15109 404 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 ERAP2Q6P179 960 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 BRAT1Q6PJG6 821 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 SASS6Q6UVJ0 657 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 SDR16C5Q8N3Y7 309 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 SCG3Q8WXD2 468 aaKnown RBP23.44■■□□□ 1.34
COL27A1-208ENST00000494780 TUBGCP5Q96RT8 1024 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 CCDC3Q9BQI4 270 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 PCDH12Q9NPG4 1184 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 COQ6Q9Y2Z9 468 aa23.44■■□□□ 1.34
COL27A1-208ENST00000494780 EIF3CLB5ME19 914 aaKnown RBP23.43■■□□□ 1.34
COL27A1-208ENST00000494780 ERVH48-1M5A8F1 160 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 KLK10O43240 276 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 PRAMEF11O60813 436 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 RASGRP1O95267 797 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 FERP16591 822 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 CDK11BP21127 795 aaKnown RBP23.43■■□□□ 1.34
COL27A1-208ENST00000494780 MLLT3P42568 568 aaPredicted RBP23.43■■□□□ 1.34
COL27A1-208ENST00000494780 RHDQ02161 417 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 SPIDRQ14159 915 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 NFATC4Q14934 902 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 CFAP58Q5T655 872 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 PPP1R2P3Q6NXS1 205 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 HID1Q8IV36 788 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 ARL10Q8N8L6 244 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 ATL2Q8NHH9 583 aa23.43■■□□□ 1.34
COL27A1-208ENST00000494780 WDR36Q8NI36 951 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms