RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 WNT9AO14904 365 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 PPP1R12AO14974 1030 aaPredicted RBP16.08■□□□□ 0.16
LIME1-209ENST00000494776 MAGEC1O60732 1142 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 PAK4O96013 591 aaPredicted RBP16.08■□□□□ 0.16
LIME1-209ENST00000494776 KRT10P13645 584 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 CCNB1P14635 433 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 PI4KAP42356 2102 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 BNC1Q01954 994 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 AP1B1Q10567 949 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 PDK1Q15118 436 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 TMEM259Q4ZIN3 620 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 TFDP3Q5H9I0 405 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 RALGPS1Q5JS13 557 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 NPNTQ6UXI9 565 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 BZW1Q7L1Q6 419 aaKnown RBP16.08■□□□□ 0.16
LIME1-209ENST00000494776 SYCE1Q8N0S2 351 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.08■□□□□ 0.16
LIME1-209ENST00000494776 TEX26Q8N6G2 289 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 MFSD2AQ8NA29 543 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 EXD1Q8NHP7 514 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 LGMNQ99538 433 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 POLR1EQ9GZS1 481 aaKnown RBP16.08■□□□□ 0.16
LIME1-209ENST00000494776 NOD2Q9HC29 1040 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 FZD3Q9NPG1 666 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 DNAAF2Q9NVR5 837 aaKnown RBP16.08■□□□□ 0.16
LIME1-209ENST00000494776 TRIM10Q9UDY6 481 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 AMFRQ9UKV5 643 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 CA5BQ9Y2D0 317 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 DMXL1Q9Y485 3027 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 ADAMTS9Q9P2N4 1935 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 A0A1W2PR77 199 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 TSPAN11A1L157 253 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 CCDC66A2RUB6 948 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 KCNK3O14649 394 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 AREL1O15033 823 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 ARHGAP6O43182 974 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 CST8O60676 142 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 MMP20O60882 483 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 TM7SF2O76062 418 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 WNT1P04628 370 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 ITIH2P19823 946 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 CTNNA1P35221 906 aaKnown RBP16.07■□□□□ 0.16
LIME1-209ENST00000494776 CETN2P41208 172 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 MARCKSL1P49006 195 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 FAM193AP78312 1265 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 PEX26Q7Z412 305 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 MAML1Q92585 1016 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 KRT35Q92764 455 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 FATE1Q969F0 183 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 KLHDC7BQ96G42 594 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 SEMA3CQ99985 751 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 WRAP53Q9BUR4 548 aaKnown RBP16.07■□□□□ 0.16
LIME1-209ENST00000494776 TSGA10Q9BZW7 698 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 SLC32A1Q9H598 525 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 IL21RQ9HBE5 538 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 PCDH12Q9NPG4 1184 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 GDF3Q9NR23 364 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 SEPT10Q9P0V9 454 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 PCDHGC4Q9Y5F7 938 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 PCDHA3Q9Y5H8 950 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 PCDH15Q96QU1 1955 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 CACNA1AO00555 2505 aa16.07■□□□□ 0.16
LIME1-209ENST00000494776 PLXNA2O75051 1894 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 A0A1W2PQ67 120 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 GRID2IPA4D2P6 1211 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 TM4SF5O14894 197 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 DFNA5O60443 496 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 CR2P20023 1033 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 TGM2P21980 687 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 CES1P23141 567 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 NFKBIAP25963 317 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 CTSKP43235 329 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 NR2C2P49116 596 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 RWDD2BP57060 319 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 PPIDQ08752 370 aaKnown RBP16.06■□□□□ 0.16
LIME1-209ENST00000494776 OVGP1Q12889 678 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 SLC14A1Q13336 389 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 SUZ12Q15022 739 aaKnown RBP16.06■□□□□ 0.16
LIME1-209ENST00000494776 CCDC181Q5TID7 509 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 IQCHQ86VS3 1027 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 LRRC8AQ8IWT6 810 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 P3H4Q92791 437 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 C1QTNF7Q9BXJ2 289 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 HEMGNQ9BXL5 484 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 BRD8Q9H0E9 1235 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 TM7SF3Q9NS93 570 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 AMACRQ9UHK6 382 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 ATP8A1Q9Y2Q0 1164 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 ADGRG1Q9Y653 693 aa16.06■□□□□ 0.16
LIME1-209ENST00000494776 hCG_1818297A0A087WSY0 165 aa16.05■□□□□ 0.16
LIME1-209ENST00000494776 A0A0U1RQJ8 604 aa16.05■□□□□ 0.16
LIME1-209ENST00000494776 A6NNZ2 444 aa16.05■□□□□ 0.16
LIME1-209ENST00000494776 KCNK1O00180 336 aa16.05■□□□□ 0.16
LIME1-209ENST00000494776 TRAFD1O14545 582 aaPredicted RBP16.05■□□□□ 0.16
LIME1-209ENST00000494776 RIOK3O14730 519 aaKnown RBP16.05■□□□□ 0.16
LIME1-209ENST00000494776 FPGTO14772 594 aa16.05■□□□□ 0.16
LIME1-209ENST00000494776 SPINT1O43278 529 aa16.05■□□□□ 0.16
LIME1-209ENST00000494776 KRT86O43790 486 aa16.05■□□□□ 0.16
LIME1-209ENST00000494776 SOCS5O75159 536 aa16.05■□□□□ 0.16
LIME1-209ENST00000494776 CPP00450 1065 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms