RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 TRPM6Q9BX84 2022 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 CPED1A4D0V7 1026 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 TMEM110-MUSTN1A8MSY1 372 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 B8ZZF3 427 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 I6L893 689 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 AGRPO00253 132 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 CES2O00748 559 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 SLC7A4O43246 635 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 FTCDO95954 541 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 F9P00740 461 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 SRCP12931 536 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 COMTP21964 271 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 CTNNA2P26232 953 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 RFC1P35251 1148 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 LSSP48449 732 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 PLK1P53350 603 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 AIF1P55008 147 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 RPL7AP62424 266 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 NFKB2Q00653 900 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 MTA1Q13330 715 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 NNTQ13423 1086 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 AUHQ13825 339 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 ISXQ2M1V0 245 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 DEFB133Q30KQ1 61 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 PERM1Q5SV97 790 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 BROXQ5VW32 411 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 NT5DC3Q86UY8 548 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 DEFB106AQ8N104 65 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 SH2D3CQ8N5H7 860 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 OR2A12Q8NGT7 310 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 GRIN3AQ8TCU5 1115 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 MAPK15Q8TD08 544 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 RPRD1AQ96P16 312 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 DEPDC7Q96QD5 511 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 WDR24Q96S15 920 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 TBCBQ99426 244 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 ABCG4Q9H172 646 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 TCEAL2Q9H3H9 227 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 KDM4CQ9H3R0 1056 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 FAM204AQ9H8W3 233 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 POLR1BQ9H9Y6 1135 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 DDX56Q9NY93 547 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 RNF14Q9UBS8 474 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 SLC25A13Q9UJS0 675 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 VPS28Q9UK41 221 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 PNMA8BQ9ULN7 279 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 HS3ST4Q9Y661 456 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 ALG6Q9Y672 507 aa11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 TLN1Q9Y490 2541 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-212ENST00000494610 NBPF19A0A087WUL8 3843 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 TCAF2A6NFQ2 919 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 C1QTNF3-AMACRE9PGA6 284 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 SPINT1O43278 529 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 EFSO43281 561 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 SLC28A2O43868 658 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 PRPSAP2O60256 369 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 MAGEC1O60732 1142 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 PCDH8O95206 1070 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 C6P13671 934 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 TFE3P19532 575 aaPredicted RBP11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 CHRNA3P32297 505 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 CTNNA1P35221 906 aaKnown RBP11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 FLT3P36888 993 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 SULT1E1P49888 294 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 RNASE9P60153 205 aaKnown RBP11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 RHDQ02161 417 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 CKAP4Q07065 602 aaKnown RBP11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 VAC14Q08AM6 782 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 OVGP1Q12889 678 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 NME3Q13232 169 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 FZD2Q14332 565 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 TCEA2Q15560 299 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 SLC25A52Q3SY17 297 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 ALFQ53S48 1182 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 ARSIQ5FYB1 569 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 SEL1L2Q5TEA6 688 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 FAM46CQ5VWP2 391 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 PAPD7Q5XG87 772 aaKnown RBP11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 EFL1Q7Z2Z2 1120 aaKnown RBP11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 PTAR1Q7Z6K3 402 aaPredicted RBP11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 PHLDB2Q86SQ0 1253 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 HORMAD1Q86X24 394 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 ATP6V0D2Q8N8Y2 350 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 EXD3Q8N9H8 876 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 ZNF548Q8NEK5 533 aaPredicted RBP11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 JOSD2Q8TAC2 188 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 RXFP2Q8WXD0 754 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 RNF34Q969K3 372 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 HES6Q96HZ4 224 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 PBKQ96KB5 322 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 NAP1L3Q99457 506 aaPredicted RBP11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 SIK2Q9H0K1 926 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 CARD9Q9H257 536 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 CLMPQ9H6B4 373 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 PREBQ9HCU5 417 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 DDIT4Q9NX09 232 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 SNX12Q9UMY4 172 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 SAR1BQ9Y6B6 198 aa11.93□□□□□ -0.5
CSNK1E-212ENST00000494610 SPENQ96T58 3664 aaKnown RBP11.92□□□□□ -0.5
CSNK1E-212ENST00000494610 A0A0D9SEW6 157 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms