RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ZNF318Q5VUA4 2279 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 TRAFD1O14545 582 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-223ENST00000494123 HTRA2O43464 458 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-223ENST00000494123 METTL18O95568 372 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 CPP00450 1065 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 ZSCAN5DPP0CG00 497 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 ADRB3P13945 408 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 FDFT1P37268 417 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 EPHB1P54762 984 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 C2orf54Q08AI8 447 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 MPP3Q13368 585 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 TRIP13Q15645 432 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-223ENST00000494123 CCDC70Q6NSX1 233 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 KDELC2Q7Z4H8 507 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 TTC7BQ86TV6 843 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 GLIS1Q8NBF1 620 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 MNS1Q8NEH6 495 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 IPMKQ8NFU5 416 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 ECHDC3Q96DC8 303 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 OXNAD1Q96HP4 312 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-223ENST00000494123 KRT12Q99456 494 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 FSD1LQ9BXM9 530 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 BTBD1Q9H0C5 482 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 NEUROG2Q9H2A3 272 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 PCDH9Q9HC56 1237 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 PCYOX1Q9UHG3 505 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 CHKBQ9Y259 395 aa14.68□□□□□ -0.06
BRCA1-223ENST00000494123 TSPAN11A1L157 253 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 E7EVH7 732 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 SLC7A4O43246 635 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 PGLSO95336 258 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 NFKBIAP25963 317 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 CD6P30203 668 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 RPL22P35268 128 aaKnown RBP14.67□□□□□ -0.06
BRCA1-223ENST00000494123 LMAN1P49257 510 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 VPS41P49754 854 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 DR1Q01658 176 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 CDK18Q07002 472 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 IHHQ14623 411 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 UGP2Q16851 508 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 FAXCQ5TGI0 409 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 AGBL4Q5VU57 503 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 ERAP2Q6P179 960 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 NDUFAF2Q8N183 169 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 LPCAT1Q8NF37 534 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 OR14C36Q8NHC7 312 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 RAB7BQ96AH8 199 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 ADGRE3Q9BY15 652 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 SGK2Q9HBY8 427 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 RAB6BQ9NRW1 208 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 ZSCAN32Q9NX65 697 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 INVSQ9Y283 1065 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 EML5Q05BV3 1969 aa14.67□□□□□ -0.06
BRCA1-223ENST00000494123 IGHV1OR15-9A0A0B4J2B8 117 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 UPK3BL1B0FP48 263 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 UPK3BL2E5RIL1 263 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 NEMP1O14524 444 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 MAP3K13O43283 966 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 NDUFS2O75306 463 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 IGLV3-19P01714 112 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 TIMP2P16035 220 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 SUOXP51687 545 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 WNT3AP56704 352 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 BASP1P80723 227 aaKnown RBP14.66□□□□□ -0.06
BRCA1-223ENST00000494123 DHX34Q14147 1143 aaKnown RBP14.66□□□□□ -0.06
BRCA1-223ENST00000494123 MAP7D1Q3KQU3 841 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 LRRC73Q5JTD7 316 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 PIP5KL1Q5T9C9 394 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 KDELC1Q6UW63 502 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 ZNF572Q7Z3I7 529 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-223ENST00000494123 ZSWIM9Q86XI8 627 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 FAM160A2Q8N612 972 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-223ENST00000494123 TADA1Q96BN2 335 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 RMDN1Q96DB5 314 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 TOE1Q96GM8 510 aaKnown RBP14.66□□□□□ -0.06
BRCA1-223ENST00000494123 MLPHQ9BV36 600 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-223ENST00000494123 PHTF1Q9UMS5 762 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 ARIH1Q9Y4X5 557 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-223ENST00000494123 FAM47DPA6NHR8 397 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 LRRC72A6NJI9 287 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 PSMD3O43242 534 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 FZD6O60353 706 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 RPP40O75818 363 aaKnown RBP14.66□□□□□ -0.06
BRCA1-223ENST00000494123 PDHA1P08559 390 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 ABL2P42684 1182 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 RPL26P61254 145 aaKnown RBP14.66□□□□□ -0.06
BRCA1-223ENST00000494123 ELP6Q0PNE2 266 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 GPS1Q13098 491 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 GALNT3Q14435 633 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 KCTD19Q17RG1 926 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-223ENST00000494123 SLC36A4Q6YBV0 504 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 SYDE1Q6ZW31 735 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-223ENST00000494123 FRMD1Q8N878 549 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 CEP112Q8N8E3 955 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 CCHCR1Q8TD31 782 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 SLCO2A1Q92959 643 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 FEM1CQ96JP0 617 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 GORASP1Q9BQQ3 440 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 ETNK1Q9HBU6 452 aa14.66□□□□□ -0.06
BRCA1-223ENST00000494123 ASIC3Q9UHC3 531 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms