RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ZDHHC4Q9NPG8 344 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 ARHGEF3Q9NR81 526 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 SYBUQ9NX95 663 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 BFARQ9NZS9 450 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 SUN2Q9UH99 717 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 IL36AQ9UHA7 158 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 CHKBQ9Y259 395 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 WASF2Q9Y6W5 498 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 MYO10Q9HD67 2058 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 SDR42E2A6NKP2 422 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 SIN3BO75182 1162 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 UGT2B4P06133 528 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 EPHX1P07099 455 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 CTSLP07711 333 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 PDHA1P08559 390 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 TPH1P17752 444 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 TIE1P35590 1138 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 ELK3P41970 407 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 RPL26P61254 145 aaKnown RBP11.49□□□□□ -0.57
MCF2L-231ENST00000494043 ELAVL3Q14576 367 aaKnown RBP11.49□□□□□ -0.57
MCF2L-231ENST00000494043 FBXO43Q4G163 708 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 CCDC38Q502W7 563 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 HP1BP3Q5SSJ5 553 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-231ENST00000494043 CERCAMQ5T4B2 595 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 ARMC12Q5T9G4 340 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 GDPD4Q6W3E5 623 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 TRMT10CQ7L0Y3 403 aaKnown RBP11.49□□□□□ -0.57
MCF2L-231ENST00000494043 ANKMY2Q8IV38 441 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 CHPFQ8IZ52 775 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 STK40Q8N2I9 435 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 MPP5Q8N3R9 675 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 GRIN3AQ8TCU5 1115 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 PDCD6IPQ8WUM4 868 aaKnown RBP11.49□□□□□ -0.57
MCF2L-231ENST00000494043 OR8D1Q8WZ84 308 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 ECHDC3Q96DC8 303 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 STAMBPL1Q96FJ0 436 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 LRIG1Q96JA1 1093 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 ZNF641Q96N77 438 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-231ENST00000494043 TTC25Q96NG3 672 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 OSBPL1AQ9BXW6 950 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 ADGRE3Q9BY15 652 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 IL22Q9GZX6 179 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 CDC42EP4Q9H3Q1 356 aaKnown RBP11.49□□□□□ -0.57
MCF2L-231ENST00000494043 SUV39H2Q9H5I1 410 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 NINJ2Q9NZG7 142 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 WNT16Q9UBV4 365 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 CA14Q9ULX7 337 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 RPL26L1Q9UNX3 145 aaKnown RBP11.49□□□□□ -0.57
MCF2L-231ENST00000494043 CHMP2BQ9UQN3 213 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 PCDHB9Q9Y5E1 797 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 TEX264Q9Y6I9 313 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 F5P12259 2224 aa11.49□□□□□ -0.57
MCF2L-231ENST00000494043 A0A1W2PQ67 120 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 LEFTY1O75610 366 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 PRNPP04156 253 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 ALADP13716 330 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 CD72P21854 359 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 NTSR1P30989 418 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 WASP42768 502 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 GRIA4P48058 902 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 CRADDP78560 199 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 MRPS21P82921 87 aaKnown RBP11.48□□□□□ -0.57
MCF2L-231ENST00000494043 MSLNQ13421 630 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-231ENST00000494043 CAMK2GQ13555 558 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-231ENST00000494043 CCINQ13939 588 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 UAP1Q16222 522 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-231ENST00000494043 QPCTQ16769 361 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 C2orf27AQ580R0 203 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 ARSIQ5FYB1 569 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 SPDYCQ5MJ68 293 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 ARMC3Q5W041 872 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 CASC4Q6P4E1 433 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 ZNF852Q6ZMS4 543 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 TRMT11Q7Z4G4 463 aaKnown RBP11.48□□□□□ -0.57
MCF2L-231ENST00000494043 ZSWIM9Q86XI8 627 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 IGDCC3Q8IVU1 814 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 UBALD2Q8IYN6 164 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 IL17RCQ8NAC3 791 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 TMIEQ8NEW7 156 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 PYROXD1Q8WU10 500 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 PIH1D2Q8WWB5 315 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 SPOCK2Q92563 424 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 RMDN1Q96DB5 314 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 C9orf72Q96LT7 481 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 EBNA1BP2Q99848 306 aaKnown RBP11.48□□□□□ -0.57
MCF2L-231ENST00000494043 GABRG3Q99928 467 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 SEMA4AQ9H3S1 761 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 PRSS16Q9NQE7 514 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 SAMD15Q9P1V8 674 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 NDRG2Q9UN36 371 aaKnown RBP11.48□□□□□ -0.57
MCF2L-231ENST00000494043 MAD1L1Q9Y6D9 718 aa11.48□□□□□ -0.57
MCF2L-231ENST00000494043 TRIOO75962 3097 aa11.47□□□□□ -0.57
MCF2L-231ENST00000494043 TSPAN11A1L157 253 aa11.47□□□□□ -0.57
MCF2L-231ENST00000494043 KRBA1A5PL33 1030 aa11.47□□□□□ -0.57
MCF2L-231ENST00000494043 ANKRD66B4E2M5 251 aa11.47□□□□□ -0.57
MCF2L-231ENST00000494043 RIPK2O43353 540 aa11.47□□□□□ -0.57
MCF2L-231ENST00000494043 SYNCRIPO60506 623 aaKnown RBP11.47□□□□□ -0.57
MCF2L-231ENST00000494043 RNF40O75150 1001 aa11.47□□□□□ -0.57
MCF2L-231ENST00000494043 KLF8O95600 359 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-231ENST00000494043 TTC4O95801 387 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms