RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 KIAA1211LQ6NV74 962 aa15.04■□□□□ -0
ACTB-213ENST00000493945 ERN2Q76MJ5 926 aaKnown RBP15.04■□□□□ -0
ACTB-213ENST00000493945 DNAAF3Q8N9W5 541 aa15.04■□□□□ -0
ACTB-213ENST00000493945 RUBCNQ92622 972 aa15.04■□□□□ -0
ACTB-213ENST00000493945 MRGPRX1Q96LB2 322 aa15.04■□□□□ -0
ACTB-213ENST00000493945 HHIPQ96QV1 700 aa15.04■□□□□ -0
ACTB-213ENST00000493945 HDAC8Q9BY41 377 aa15.04■□□□□ -0
ACTB-213ENST00000493945 FAM126AQ9BYI3 521 aaPredicted RBP15.04■□□□□ -0
ACTB-213ENST00000493945 ETNK1Q9HBU6 452 aa15.04■□□□□ -0
ACTB-213ENST00000493945 XAB2Q9HCS7 855 aaKnown RBP15.04■□□□□ -0
ACTB-213ENST00000493945 FAM114A2Q9NRY5 505 aa15.04■□□□□ -0
ACTB-213ENST00000493945 EBF1Q9UH73 591 aa15.04■□□□□ -0
ACTB-213ENST00000493945 SHOC2Q9UQ13 582 aa15.04■□□□□ -0
ACTB-213ENST00000493945 PCDHB9Q9Y5E1 797 aa15.04■□□□□ -0
ACTB-213ENST00000493945 TSPAN11A1L157 253 aa15.03■□□□□ -0
ACTB-213ENST00000493945 DNALI1O14645 258 aaPredicted RBP15.03■□□□□ -0
ACTB-213ENST00000493945 RNASEH2AO75792 299 aaKnown RBP15.03■□□□□ -0
ACTB-213ENST00000493945 HEXIM1O94992 359 aaKnown RBP15.03■□□□□ -0
ACTB-213ENST00000493945 MT-CYBP00156 380 aaPredicted RBP15.03■□□□□ -0
ACTB-213ENST00000493945 PDGFBP01127 241 aaPredicted RBP15.03■□□□□ -0
ACTB-213ENST00000493945 ETS1P14921 441 aa15.03■□□□□ -0
ACTB-213ENST00000493945 NDUFV2P19404 249 aa15.03■□□□□ -0
ACTB-213ENST00000493945 ITIH2P19823 946 aa15.03■□□□□ -0
ACTB-213ENST00000493945 HOXA6P31267 233 aa15.03■□□□□ -0
ACTB-213ENST00000493945 PTGIRP43119 386 aa15.03■□□□□ -0
ACTB-213ENST00000493945 COPAP53621 1224 aa15.03■□□□□ -0
ACTB-213ENST00000493945 PDE1BQ01064 536 aa15.03■□□□□ -0
ACTB-213ENST00000493945 ARHGEF7Q14155 803 aa15.03■□□□□ -0
ACTB-213ENST00000493945 USP39Q53GS9 565 aaKnown RBP15.03■□□□□ -0
ACTB-213ENST00000493945 IZUMO3Q5VZ72 239 aa15.03■□□□□ -0
ACTB-213ENST00000493945 TMEM92Q6UXU6 159 aa15.03■□□□□ -0
ACTB-213ENST00000493945 CAMK1DQ8IU85 385 aa15.03■□□□□ -0
ACTB-213ENST00000493945 C1orf210Q8IVY1 113 aa15.03■□□□□ -0
ACTB-213ENST00000493945 PDCD7Q8N8D1 485 aaKnown RBP15.03■□□□□ -0
ACTB-213ENST00000493945 LPCAT1Q8NF37 534 aa15.03■□□□□ -0
ACTB-213ENST00000493945 SPATA22Q8NHS9 363 aa15.03■□□□□ -0
ACTB-213ENST00000493945 ECHDC3Q96DC8 303 aa15.03■□□□□ -0
ACTB-213ENST00000493945 ZNF419Q96HQ0 510 aaPredicted RBP15.03■□□□□ -0
ACTB-213ENST00000493945 FAM129BQ96TA1 746 aa15.03■□□□□ -0
ACTB-213ENST00000493945 FICDQ9BVA6 458 aa15.03■□□□□ -0
ACTB-213ENST00000493945 COL25A1Q9BXS0 654 aaPredicted RBP15.03■□□□□ -0
ACTB-213ENST00000493945 TSPYL1Q9H0U9 437 aa15.03■□□□□ -0
ACTB-213ENST00000493945 KDM4CQ9H3R0 1056 aa15.03■□□□□ -0
ACTB-213ENST00000493945 TRABDQ9H4I3 376 aa15.03■□□□□ -0
ACTB-213ENST00000493945 MTG2Q9H4K7 406 aa15.03■□□□□ -0
ACTB-213ENST00000493945 FBXL12Q9NXK8 326 aa15.03■□□□□ -0
ACTB-213ENST00000493945 KCTD5Q9NXV2 234 aa15.03■□□□□ -0
ACTB-213ENST00000493945 UBP1Q9NZI7 540 aa15.03■□□□□ -0
ACTB-213ENST00000493945 DLGAP2Q9P1A6 1054 aa15.03■□□□□ -0
ACTB-213ENST00000493945 WHRNQ9P202 907 aa15.03■□□□□ -0
ACTB-213ENST00000493945 FBXO4Q9UKT5 387 aa15.03■□□□□ -0
ACTB-213ENST00000493945 PCDHGC4Q9Y5F7 938 aa15.03■□□□□ -0
ACTB-213ENST00000493945 LRRC72A6NJI9 287 aa15.02■□□□□ -0
ACTB-213ENST00000493945 C16orf96A6NNT2 1141 aa15.02■□□□□ -0
ACTB-213ENST00000493945 F5H423 210 aaPredicted RBP15.02■□□□□ -0
ACTB-213ENST00000493945 MID1O15344 667 aa15.02■□□□□ -0
ACTB-213ENST00000493945 SUN1O94901 812 aa15.02■□□□□ -0
ACTB-213ENST00000493945 METTL18O95568 372 aa15.02■□□□□ -0
ACTB-213ENST00000493945 CTSLP07711 333 aa15.02■□□□□ -0
ACTB-213ENST00000493945 ZSCAN5DPP0CG00 497 aa15.02■□□□□ -0
ACTB-213ENST00000493945 C7P10643 843 aa15.02■□□□□ -0
ACTB-213ENST00000493945 ADRB3P13945 408 aa15.02■□□□□ -0
ACTB-213ENST00000493945 GABRG2P18507 467 aa15.02■□□□□ -0
ACTB-213ENST00000493945 COL9A1P20849 921 aa15.02■□□□□ -0
ACTB-213ENST00000493945 DRG2P55039 364 aaKnown RBP15.02■□□□□ -0
ACTB-213ENST00000493945 TRAF2Q12933 501 aa15.02■□□□□ -0
ACTB-213ENST00000493945 DNAJC21Q5F1R6 531 aaKnown RBP15.02■□□□□ -0
ACTB-213ENST00000493945 TMEM31Q5JXX7 168 aa15.02■□□□□ -0
ACTB-213ENST00000493945 TEX35Q5T0J7 233 aa15.02■□□□□ -0
ACTB-213ENST00000493945 FAXCQ5TGI0 409 aa15.02■□□□□ -0
ACTB-213ENST00000493945 PKN3Q6P5Z2 889 aa15.02■□□□□ -0
ACTB-213ENST00000493945 TTC7BQ86TV6 843 aa15.02■□□□□ -0
ACTB-213ENST00000493945 PRPF39Q86UA1 669 aaKnown RBP15.02■□□□□ -0
ACTB-213ENST00000493945 RASSF3Q86WH2 238 aa15.02■□□□□ -0
ACTB-213ENST00000493945 CACUL1Q86Y37 369 aa15.02■□□□□ -0
ACTB-213ENST00000493945 KLHDC8BQ8IXV7 354 aa15.02■□□□□ -0
ACTB-213ENST00000493945 IFT20Q8IY31 132 aa15.02■□□□□ -0
ACTB-213ENST00000493945 HDDC3Q8N4P3 179 aa15.02■□□□□ -0
ACTB-213ENST00000493945 DTWD2Q8NBA8 298 aa15.02■□□□□ -0
ACTB-213ENST00000493945 UBXN4Q92575 508 aa15.02■□□□□ -0
ACTB-213ENST00000493945 TADA1Q96BN2 335 aa15.02■□□□□ -0
ACTB-213ENST00000493945 OXNAD1Q96HP4 312 aaPredicted RBP15.02■□□□□ -0
ACTB-213ENST00000493945 PRRX2Q99811 253 aa15.02■□□□□ -0
ACTB-213ENST00000493945 TRIM51Q9BSJ1 452 aa15.02■□□□□ -0
ACTB-213ENST00000493945 MLPHQ9BV36 600 aaPredicted RBP15.02■□□□□ -0
ACTB-213ENST00000493945 TRIM31Q9BZY9 425 aa15.02■□□□□ -0
ACTB-213ENST00000493945 MKRN2Q9H000 416 aaKnown RBP15.02■□□□□ -0
ACTB-213ENST00000493945 BTBD1Q9H0C5 482 aa15.02■□□□□ -0
ACTB-213ENST00000493945 SGK2Q9HBY8 427 aa15.02■□□□□ -0
ACTB-213ENST00000493945 PRMT8Q9NR22 394 aaPredicted RBP15.02■□□□□ -0
ACTB-213ENST00000493945 BFARQ9NZS9 450 aa15.02■□□□□ -0
ACTB-213ENST00000493945 MTRF1LQ9UGC7 380 aaKnown RBP15.02■□□□□ -0
ACTB-213ENST00000493945 CHKBQ9Y259 395 aa15.02■□□□□ -0
ACTB-213ENST00000493945 NEU2Q9Y3R4 380 aa15.02■□□□□ -0
ACTB-213ENST00000493945 A0A1W2PP55 124 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 TRAFD1O14545 582 aaPredicted RBP15.01□□□□□ -0.01
ACTB-213ENST00000493945 AXIN1O15169 862 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 TSPAN6O43657 245 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 AP1G1O43747 822 aa15.01□□□□□ -0.01
ACTB-213ENST00000493945 GPR37L1O60883 481 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms