RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 GPR27Q9NS67 375 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 BTBD3Q9Y2F9 522 aa22.84■■□□□ 1.25
SNIP1-203ENST00000493916 RAD51BO15315 384 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 CR2P20023 1033 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 SCNN1BP51168 640 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 CLDN2P57739 230 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 SPA17Q15506 151 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 ZFYVE27Q5T4F4 411 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 MARC1Q5VT66 337 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 ZSWIM9Q86XI8 627 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 DCP2Q8IU60 420 aaKnown RBP22.83■■□□□ 1.25
SNIP1-203ENST00000493916 PGBD5Q8N414 524 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 TEX26Q8N6G2 289 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 RHBDD1Q8TEB9 315 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 SPOCK2Q92563 424 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 FATE1Q969F0 183 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 BMFQ96LC9 184 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 NUDCD1Q96RS6 583 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 PCDH12Q9NPG4 1184 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 LUC7LQ9NQ29 371 aaKnown RBP22.83■■□□□ 1.25
SNIP1-203ENST00000493916 ANGPTL2Q9UKU9 493 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 PCDHA13Q9Y5I0 950 aa22.83■■□□□ 1.25
SNIP1-203ENST00000493916 DOCK9Q9BZ29 2069 aa22.83■■□□□ 1.24
SNIP1-203ENST00000493916 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.82■■□□□ 1.24
SNIP1-203ENST00000493916 LRRD1A4D1F6 860 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 C3orf70A6NLC5 250 aaPredicted RBP22.82■■□□□ 1.24
SNIP1-203ENST00000493916 TRAFD1O14545 582 aaPredicted RBP22.82■■□□□ 1.24
SNIP1-203ENST00000493916 ITIH2P19823 946 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 MMP12P39900 470 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 MMP13P45452 471 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 RALGPS1Q5JS13 557 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 TIGD7Q6NT04 549 aaPredicted RBP22.82■■□□□ 1.24
SNIP1-203ENST00000493916 ERAP2Q6P179 960 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 TMTC1Q8IUR5 882 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 SLC22A18ASQ8N1D0 253 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 RNF157Q96PX1 679 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 C1QTNF7Q9BXJ2 289 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 WASF3Q9UPY6 502 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 ATP8A1Q9Y2Q0 1164 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 TRPM6Q9BX84 2022 aa22.82■■□□□ 1.24
SNIP1-203ENST00000493916 A0A0A6YYK5 440 aaPredicted RBP22.81■■□□□ 1.24
SNIP1-203ENST00000493916 POM121BA6NF01 834 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 RIOK3O14730 519 aaKnown RBP22.81■■□□□ 1.24
SNIP1-203ENST00000493916 FPGTO14772 594 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 MMP20O60882 483 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 SOCS5O75159 536 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 TM7SF2O76062 418 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 TRIM16O95361 564 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 MX2P20592 715 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 COMTP21964 271 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 RABIFP47224 123 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 IFI16Q16666 785 aaKnown RBP22.81■■□□□ 1.24
SNIP1-203ENST00000493916 Q6ZSR6 202 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 PTAR1Q7Z6K3 402 aaPredicted RBP22.81■■□□□ 1.24
SNIP1-203ENST00000493916 RHOT1Q8IXI2 618 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 MAML1Q92585 1016 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 CENPTQ96BT3 561 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 IFT43Q96FT9 208 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 NSMCE3Q96MG7 304 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 TSGA13Q96PP4 275 aa22.81■■□□□ 1.24
SNIP1-203ENST00000493916 COL5A1P20908 1838 aaPredicted RBP22.8■■□□□ 1.24
SNIP1-203ENST00000493916 A0A1W2PQ67 120 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 SOWAHDA6NJG2 315 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 PCNX2A6NKB5 2137 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 HTRA2O43464 458 aaPredicted RBP22.8■■□□□ 1.24
SNIP1-203ENST00000493916 ITGAVP06756 1048 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 CCNCP24863 283 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 POLR2LP62875 67 aaKnown RBP22.8■■□□□ 1.24
SNIP1-203ENST00000493916 GBE1Q04446 702 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 FOXC1Q12948 553 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 KANSL1Q7Z3B3 1105 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 GATAD2AQ86YP4 633 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 WRAP53Q9BUR4 548 aaKnown RBP22.8■■□□□ 1.24
SNIP1-203ENST00000493916 NOD2Q9HC29 1040 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 SCUBE2Q9NQ36 999 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 DDX56Q9NY93 547 aaKnown RBP22.8■■□□□ 1.24
SNIP1-203ENST00000493916 DTLQ9NZJ0 730 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 KNL1Q8NG31 2342 aa22.8■■□□□ 1.24
SNIP1-203ENST00000493916 CFAP69A5D8W1 941 aa22.79■■□□□ 1.24
SNIP1-203ENST00000493916 MATN3O15232 486 aa22.79■■□□□ 1.24
SNIP1-203ENST00000493916 SPOPO43791 374 aa22.79■■□□□ 1.24
SNIP1-203ENST00000493916 NDUFA10O95299 355 aa22.79■■□□□ 1.24
SNIP1-203ENST00000493916 KRT1P04264 644 aa22.79■■□□□ 1.24
SNIP1-203ENST00000493916 FTH1P19P0C7X4 201 aa22.79■■□□□ 1.24
SNIP1-203ENST00000493916 CDC25BP30305 580 aa22.79■■□□□ 1.24
SNIP1-203ENST00000493916 NOP2P46087 812 aaKnown RBP22.79■■□□□ 1.24
SNIP1-203ENST00000493916 PFN3P60673 137 aa22.79■■□□□ 1.24
SNIP1-203ENST00000493916 SLC9A4Q6AI14 798 aa22.79■■□□□ 1.24
SNIP1-203ENST00000493916 PLD5Q8N7P1 536 aa22.79■■□□□ 1.24
SNIP1-203ENST00000493916 TP53I13Q8NBR0 393 aaPredicted RBP22.79■■□□□ 1.24
SNIP1-203ENST00000493916 HDAC11Q96DB2 347 aa22.79■■□□□ 1.24
SNIP1-203ENST00000493916 AMACRQ9UHK6 382 aa22.79■■□□□ 1.24
SNIP1-203ENST00000493916 EPN1Q9Y6I3 576 aaPredicted RBP22.79■■□□□ 1.24
SNIP1-203ENST00000493916 TTC24A2A3L6 582 aaPredicted RBP22.78■■□□□ 1.24
SNIP1-203ENST00000493916 TOR1BO14657 336 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 TNFSF14O43557 240 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 PSTPIP1O43586 416 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 MAP3K6O95382 1288 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 C6P13671 934 aa22.78■■□□□ 1.24
SNIP1-203ENST00000493916 IGFALSP35858 605 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms